From debbugs-submit-bounces@debbugs.gnu.org Fri Jul 17 06:14:28 2020 Received: (at submit) by debbugs.gnu.org; 17 Jul 2020 10:14:28 +0000 Received: from localhost ([127.0.0.1]:56752 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jwNNs-00008G-7w for submit@debbugs.gnu.org; Fri, 17 Jul 2020 06:14:28 -0400 Received: from lists.gnu.org ([209.51.188.17]:53150) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jwNNo-000087-98 for submit@debbugs.gnu.org; Fri, 17 Jul 2020 06:14:26 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:33776) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1jwNNo-0007JN-4N for bug-guix@gnu.org; Fri, 17 Jul 2020 06:14:24 -0400 Received: from m4s11.vlinux.de ([83.151.27.109]:46640 helo=bjoernhoefling.de) by eggs.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1jwNNj-0004xc-Ky for bug-guix@gnu.org; Fri, 17 Jul 2020 06:14:23 -0400 Received: from alma-ubu (p57b5255f.dip0.t-ipconnect.de [87.181.37.95]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by bjoernhoefling.de (Postfix) with ESMTPSA id 296233F943 for ; Fri, 17 Jul 2020 12:14:15 +0200 (CEST) Date: Fri, 17 Jul 2020 12:14:14 +0200 From: =?UTF-8?B?QmrDtnJuIEjDtmZsaW5n?= To: Subject: r-hdf5array fails to build Message-ID: <20200717121414.056f6ddf@alma-ubu> X-Mailer: Claws Mail 3.16.0 (GTK+ 2.24.32; x86_64-pc-linux-gnu) MIME-Version: 1.0 Content-Type: multipart/signed; micalg=pgp-sha512; boundary="Sig_/vceVeUYH4BzP2+c1=syLYbd"; protocol="application/pgp-signature" Received-SPF: none client-ip=83.151.27.109; envelope-from=bjoern.hoefling@bjoernhoefling.de; helo=bjoernhoefling.de X-detected-operating-system: by eggs.gnu.org: First seen = 2020/07/17 06:14:15 X-ACL-Warn: Detected OS = Linux 2.2.x-3.x [generic] X-Spam_score_int: 1 X-Spam_score: 0.1 X-Spam_bar: / X-Spam_report: (0.1 / 5.0 requ) BAYES_00=-1.9, KHOP_HELO_FCRDNS=1, SPF_HELO_NONE=0.001, SPF_NONE=0.001, TVD_SUBJ_NUM_OBFU_MINFP=1, URIBL_BLOCKED=0.001 autolearn=no autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.3 (-) X-Debbugs-Envelope-To: submit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) --Sig_/vceVeUYH4BzP2+c1=syLYbd Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable It is missing the (proprietary) SZIP Compression Library. Bj=C3=B6rn building /gnu/store/awjf253pcjsf8wkl6cigxxd0dxqp97q7-r-hdf5array-1.16.1.drv= ... [...] starting phase `install' * installing *source* package ?HDF5Array? ... ** using staged installation ** libs gcc -I"/gnu/store/yd83ibzxjrb7cgcc6d4smx4pqcdl8r3p-r-minimal-4.0.2/lib/R/in= clude" -DNDEBUG -I'/gnu/store/8yrjj7wdbz6x9pnxhmf2ka4fl72yy154-r-s4vectors= -0.26.1/site-library/S4Vectors/include' -I'/gnu/store/cfr4bbglibavxbqxhn3pg= 3pfar6qqpiw-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/include' -I/usr/local/i= nclude -fpic -g -O2 -c H5DSetDescriptor.c -o H5DSetDescriptor.o gcc -I"/gnu/store/yd83ibzxjrb7cgcc6d4smx4pqcdl8r3p-r-minimal-4.0.2/lib/R/in= clude" -DNDEBUG -I'/gnu/store/8yrjj7wdbz6x9pnxhmf2ka4fl72yy154-r-s4vectors= -0.26.1/site-library/S4Vectors/include' -I'/gnu/store/cfr4bbglibavxbqxhn3pg= 3pfar6qqpiw-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/include' -I/usr/local/i= nclude -fpic -g -O2 -c R_init_HDF5Array.c -o R_init_HDF5Array.o gcc -I"/gnu/store/yd83ibzxjrb7cgcc6d4smx4pqcdl8r3p-r-minimal-4.0.2/lib/R/in= clude" -DNDEBUG -I'/gnu/store/8yrjj7wdbz6x9pnxhmf2ka4fl72yy154-r-s4vectors= -0.26.1/site-library/S4Vectors/include' -I'/gnu/store/cfr4bbglibavxbqxhn3pg= 3pfar6qqpiw-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/include' -I/usr/local/i= nclude -fpic -g -O2 -c S4Vectors_stubs.c -o S4Vectors_stubs.o gcc -I"/gnu/store/yd83ibzxjrb7cgcc6d4smx4pqcdl8r3p-r-minimal-4.0.2/lib/R/in= clude" -DNDEBUG -I'/gnu/store/8yrjj7wdbz6x9pnxhmf2ka4fl72yy154-r-s4vectors= -0.26.1/site-library/S4Vectors/include' -I'/gnu/store/cfr4bbglibavxbqxhn3pg= 3pfar6qqpiw-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/include' -I/usr/local/i= nclude -fpic -g -O2 -c array_selection.c -o array_selection.o gcc -I"/gnu/store/yd83ibzxjrb7cgcc6d4smx4pqcdl8r3p-r-minimal-4.0.2/lib/R/in= clude" -DNDEBUG -I'/gnu/store/8yrjj7wdbz6x9pnxhmf2ka4fl72yy154-r-s4vectors= -0.26.1/site-library/S4Vectors/include' -I'/gnu/store/cfr4bbglibavxbqxhn3pg= 3pfar6qqpiw-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/include' -I/usr/local/i= nclude -fpic -g -O2 -c h5dimscales.c -o h5dimscales.o gcc -I"/gnu/store/yd83ibzxjrb7cgcc6d4smx4pqcdl8r3p-r-minimal-4.0.2/lib/R/in= clude" -DNDEBUG -I'/gnu/store/8yrjj7wdbz6x9pnxhmf2ka4fl72yy154-r-s4vectors= -0.26.1/site-library/S4Vectors/include' -I'/gnu/store/cfr4bbglibavxbqxhn3pg= 3pfar6qqpiw-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/include' -I/usr/local/i= nclude -fpic -g -O2 -c h5mread.c -o h5mread.o gcc -shared -L/gnu/store/yd83ibzxjrb7cgcc6d4smx4pqcdl8r3p-r-minimal-4.0.2/l= ib/R/lib -L/usr/local/lib -o HDF5Array.so H5DSetDescriptor.o R_init_HDF5Arr= ay.o S4Vectors_stubs.o array_selection.o h5dimscales.o h5mread.o /gnu/store= /cfr4bbglibavxbqxhn3pg3pfar6qqpiw-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/l= ib/libhdf5_hl.a /gnu/store/cfr4bbglibavxbqxhn3pg3pfar6qqpiw-r-rhdf5lib-1.10= .1/site-library/Rhdf5lib/lib/libhdf5.a /gnu/store/cfr4bbglibavxbqxhn3pg3pfa= r6qqpiw-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/lib/libsz.a -lz -L/gnu/stor= e/yd83ibzxjrb7cgcc6d4smx4pqcdl8r3p-r-minimal-4.0.2/lib/R/lib -lR gcc: error: /gnu/store/cfr4bbglibavxbqxhn3pg3pfar6qqpiw-r-rhdf5lib-1.10.1/s= ite-library/Rhdf5lib/lib/libsz.a: No such file or directory make: *** [/gnu/store/yd83ibzxjrb7cgcc6d4smx4pqcdl8r3p-r-minimal-4.0.2/lib/= R/share/make/shlib.mk:6: HDF5Array.so] Error 1 ERROR: compilation failed for package ?HDF5Array? * removing ?/gnu/store/g4lk6nfyfsfcdaw69dwj96n8z8ygzf79-r-hdf5array-1.16.1/= site-library/HDF5Array? command "R" "CMD" "INSTALL" "--install-tests" "--library=3D/gnu/store/g4lk6= nfyfsfcdaw69dwj96n8z8ygzf79-r-hdf5array-1.16.1/site-library/" "--built-time= stamp=3D1970-01-01" "." failed with status 1 note: keeping build directory `/tmp/guix-build-r-hdf5array-1.16.1.drv-0' builder for `/gnu/store/awjf253pcjsf8wkl6cigxxd0dxqp97q7-r-hdf5array-1.16.1= .drv' failed with exit code 1 --Sig_/vceVeUYH4BzP2+c1=syLYbd Content-Type: application/pgp-signature Content-Description: OpenPGP digital signature -----BEGIN PGP SIGNATURE----- iF0EAREKAB0WIQQiGUP0np8nb5SZM4K/KGy2WT5f/QUCXxF59gAKCRC/KGy2WT5f /RjTAJ4mO5q7txHOP4gSXqc6F8GkmGyhQgCeJyr897tNpvroNbZ17sN5LdRkvbw= =hgHd -----END PGP SIGNATURE----- --Sig_/vceVeUYH4BzP2+c1=syLYbd-- From debbugs-submit-bounces@debbugs.gnu.org Wed Oct 28 15:14:08 2020 Received: (at 42405) by debbugs.gnu.org; 28 Oct 2020 19:14:08 +0000 Received: from localhost ([127.0.0.1]:50750 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kXqtb-0006hA-Tl for submit@debbugs.gnu.org; Wed, 28 Oct 2020 15:14:08 -0400 Received: from mail-wr1-f65.google.com ([209.85.221.65]:44287) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kXqta-0006gZ-5U for 42405@debbugs.gnu.org; Wed, 28 Oct 2020 15:14:06 -0400 Received: by mail-wr1-f65.google.com with SMTP id t9so237021wrq.11 for <42405@debbugs.gnu.org>; Wed, 28 Oct 2020 12:14:06 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:references:date:in-reply-to:message-id :user-agent:mime-version:content-transfer-encoding; bh=iVunbiSrOxSwwZmeCX5b7mNtAySGbhVKchauk6l5IQE=; b=d4UQ/fghodNFCBz8q8TEkK56/BCvLy/naG/AHCJ5ZlkUa+eyPJfhzSFvr/GMHPlJm0 pkO0O+3S4+Tbv61v9xqNxvspZo7II7NqmF8UwdMj+40ygPoImgsUHBCfy+hDXk7VCfuf yWvhW0e4FhEFvB9FyQUaGEoxrz2Rf/q9MOum/tpYbSeCnqywEH2ABKXeOSW8XiJAQAfB X/bXIZpZiftqGJgdDLo4NFTA5Z58wHWs9n4qM4MTL5gjL7qSgenhgPowt5IZ9C0XrPJb 8ya/Y3el8XT8l3JUELB9ZHiLkqPdYIw0toBhKvF8P8pTCBBEm7bs33VHt5A9lIcc4ajO BxQA== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:references:date:in-reply-to :message-id:user-agent:mime-version:content-transfer-encoding; bh=iVunbiSrOxSwwZmeCX5b7mNtAySGbhVKchauk6l5IQE=; b=dLHDrQB1w/0hAu+pzwd1uMFgEP4NIZlMSviwEykHS9LVIYkr1rk7v+PuiAvx07DKGR TwT252lJ3Sgpt86WJcf+m10paI6wAVs3hM7CVM+oiMpuXKG93gnqx88cs0tEDaSHLozq 19mTvHXtfTNh3Vx60GdERMlicG5Jb0UlhPTqbSKRaP7+wxSh0f72v1AoIcPw3G0WFMlx 09dqf81+UH3MYI5o5U1rnWRqwhNcWKRa32e2w+X34iKwKkxj/i3kobWnfE4CzIuKLSD+ owfS+WeFzu/kKYtaJGVTJt4WjrOZpB9apJAna5JpNWs5+MkZjNnZlXrn4BV1sPLwkKzh kfzw== X-Gm-Message-State: AOAM532zNfbdRH/5VukKKtNEXUpQhvQzTeBAXtITQZ+BjoVSWdbTu8Xp MlGx2SIw8nv+BZRdPUCRcGDuYJ6b5tU= X-Google-Smtp-Source: ABdhPJxzPDp9OpDIpmcJE9EoFLZRkiHLUop6+AvyvhFS9iOKIlwe0VMekdConbDWMRQLEy0lFZrRAA== X-Received: by 2002:adf:cd8d:: with SMTP id q13mr937330wrj.268.1603912439987; Wed, 28 Oct 2020 12:13:59 -0700 (PDT) Received: from lili ([2a01:e0a:59b:9120:65d2:2476:f637:db1e]) by smtp.gmail.com with ESMTPSA id a3sm437988wmb.46.2020.10.28.12.13.58 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 28 Oct 2020 12:13:59 -0700 (PDT) From: zimoun To: =?utf-8?Q?Bj=C3=B6rn_H=C3=B6fling?= Subject: Re: bug#42405: r-hdf5array fails to build References: <20200717121414.056f6ddf@alma-ubu> Date: Wed, 28 Oct 2020 20:13:58 +0100 In-Reply-To: <20200717121414.056f6ddf@alma-ubu> (=?utf-8?Q?=22Bj=C3=B6rn?= =?utf-8?Q?_H=C3=B6fling=22's?= message of "Fri, 17 Jul 2020 12:14:14 +0200") Message-ID: <86lffqyxhl.fsf@gmail.com> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/27.1 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 42405 Cc: 42405@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Dear, On Fri, 17 Jul 2020 at 12:14, Bj=C3=B6rn H=C3=B6fling wrote: > It is missing the (proprietary) SZIP Compression Library. Well, it built fine with 63b75c01c2374edc38437215278f50b617a12c08. And now using Guix 02c3c51, I get also fine: --8<---------------cut here---------------start------------->8--- $ guix build r-hdf5array /gnu/store/qrxrky9jj0mv96yy1875qfwwig7mgsyd-r-hdf5array-1.16.1 $ guix build r-hdf5array --no-grafts --check=20 The following derivation will be built: /gnu/store/l59g16jyb2n2nw2n72qzxa5yapkwai51-r-hdf5array-1.16.1.drv building /gnu/store/l59g16jyb2n2nw2n72qzxa5yapkwai51-r-hdf5array-1.16.1.drv= ... [...] starting phase `install' * installing *source* package =E2=80=98HDF5Array=E2=80=99 ... ** using staged installation ** libs gcc -I"/gnu/store/01xi3sig314wgwa1j9sxk37vl816mj74-r-minimal-4.0.3/lib/R/in= clude" -DNDEBUG -I'/gnu/store/c1pkb6xv0zjapcgvjl7ihng65c2q83rw-r-s4vectors= -0.26.1/site-library/S4Vectors/include' -I'/gnu/store/l95pry5yf7x634jchpvas= rsqqqvlx7dm-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/include' -I/usr/local/i= nclude -fpic -g -O2 -c H5DSetDescriptor.c -o H5DSetDescriptor.o gcc -I"/gnu/store/01xi3sig314wgwa1j9sxk37vl816mj74-r-minimal-4.0.3/lib/R/in= clude" -DNDEBUG -I'/gnu/store/c1pkb6xv0zjapcgvjl7ihng65c2q83rw-r-s4vectors= -0.26.1/site-library/S4Vectors/include' -I'/gnu/store/l95pry5yf7x634jchpvas= rsqqqvlx7dm-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/include' -I/usr/local/i= nclude -fpic -g -O2 -c R_init_HDF5Array.c -o R_init_HDF5Array.o gcc -I"/gnu/store/01xi3sig314wgwa1j9sxk37vl816mj74-r-minimal-4.0.3/lib/R/in= clude" -DNDEBUG -I'/gnu/store/c1pkb6xv0zjapcgvjl7ihng65c2q83rw-r-s4vectors= -0.26.1/site-library/S4Vectors/include' -I'/gnu/store/l95pry5yf7x634jchpvas= rsqqqvlx7dm-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/include' -I/usr/local/i= nclude -fpic -g -O2 -c S4Vectors_stubs.c -o S4Vectors_stubs.o gcc -I"/gnu/store/01xi3sig314wgwa1j9sxk37vl816mj74-r-minimal-4.0.3/lib/R/in= clude" -DNDEBUG -I'/gnu/store/c1pkb6xv0zjapcgvjl7ihng65c2q83rw-r-s4vectors= -0.26.1/site-library/S4Vectors/include' -I'/gnu/store/l95pry5yf7x634jchpvas= rsqqqvlx7dm-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/include' -I/usr/local/i= nclude -fpic -g -O2 -c array_selection.c -o array_selection.o gcc -I"/gnu/store/01xi3sig314wgwa1j9sxk37vl816mj74-r-minimal-4.0.3/lib/R/in= clude" -DNDEBUG -I'/gnu/store/c1pkb6xv0zjapcgvjl7ihng65c2q83rw-r-s4vectors= -0.26.1/site-library/S4Vectors/include' -I'/gnu/store/l95pry5yf7x634jchpvas= rsqqqvlx7dm-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/include' -I/usr/local/i= nclude -fpic -g -O2 -c h5dimscales.c -o h5dimscales.o gcc -I"/gnu/store/01xi3sig314wgwa1j9sxk37vl816mj74-r-minimal-4.0.3/lib/R/in= clude" -DNDEBUG -I'/gnu/store/c1pkb6xv0zjapcgvjl7ihng65c2q83rw-r-s4vectors= -0.26.1/site-library/S4Vectors/include' -I'/gnu/store/l95pry5yf7x634jchpvas= rsqqqvlx7dm-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/include' -I/usr/local/i= nclude -fpic -g -O2 -c h5mread.c -o h5mread.o gcc -shared -L/gnu/store/01xi3sig314wgwa1j9sxk37vl816mj74-r-minimal-4.0.3/l= ib/R/lib -L/usr/local/lib -o HDF5Array.so H5DSetDescriptor.o R_init_HDF5Arr= ay.o S4Vectors_stubs.o array_selection.o h5dimscales.o h5mread.o /gnu/store= /l95pry5yf7x634jchpvasrsqqqvlx7dm-r-rhdf5lib-1.10.1/site-library/Rhdf5lib/l= ib/libhdf5_hl.a /gnu/store/l95pry5yf7x634jchpvasrsqqqvlx7dm-r-rhdf5lib-1.10= .1/site-library/Rhdf5lib/lib/libhdf5.a -lz -L/gnu/store/01xi3sig314wgwa1j9s= xk37vl816mj74-r-minimal-4.0.3/lib/R/lib -lR installing to /gnu/store/w29frb8jpz0w8xkj7p4rxvs7agzqfpvv-r-hdf5array-1.16.= 1/site-library/00LOCK-HDF5Array/00new/HDF5Array/libs ** R ** inst ** tests ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation pa= th * DONE (HDF5Array) [...] successfully built /gnu/store/l59g16jyb2n2nw2n72qzxa5yapkwai51-r-hdf5array-= 1.16.1.drv /gnu/store/w29frb8jpz0w8xkj7p4rxvs7agzqfpvv-r-hdf5array-1.16.1 --8<---------------cut here---------------end--------------->8--- Could you confirm it works for you? If yes, feel free to close the bug? All the best, simon From debbugs-submit-bounces@debbugs.gnu.org Sun Dec 20 02:58:54 2020 Received: (at 42405) by debbugs.gnu.org; 20 Dec 2020 07:58:54 +0000 Received: from localhost ([127.0.0.1]:43616 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kqtcE-0008Ru-Ej for submit@debbugs.gnu.org; Sun, 20 Dec 2020 02:58:54 -0500 Received: from mail-wr1-f49.google.com ([209.85.221.49]:34597) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kqtcA-0008RY-3g for 42405@debbugs.gnu.org; Sun, 20 Dec 2020 02:58:52 -0500 Received: by mail-wr1-f49.google.com with SMTP id q18so7517733wrn.1 for <42405@debbugs.gnu.org>; Sat, 19 Dec 2020 23:58:49 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:references:date:in-reply-to:message-id :user-agent:mime-version; bh=CnJjwJqhLO2PHdWv2dCrxpvx0tS5XvT8l9+YToQ0XrM=; b=S9bgRPgqv1cTmcyWkVlUbH/gbakPEeoeIhEYZjldMTUWxCKZhFbkHyjwkdLXvFKK4l q0Nz0C8n+ZBFwag6D5gIBeoMADjT4P3R/eIK+aBouNmT9LQhoD9BpODhA1uuV+fXsda/ zUVJe1A47EtNPXFAnEhNA0fnsG/gCw6G+aF1puSWdc/4KtLvwc4JT/VIjhXSDtQ5qa+C 0Idw9zJ2K+39cUGyZEw/kx8WVduJiVNXsQPoQ4PPhph+eA2bkHx1V5PEuLmB9pRH/aRk Z7BGrxzIn72hxper8L1bKU9ewhkneJs50mVTcFjPfu6kD/4POKBOJZt/sr3qipVjkgsI ikFw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:references:date:in-reply-to :message-id:user-agent:mime-version; bh=CnJjwJqhLO2PHdWv2dCrxpvx0tS5XvT8l9+YToQ0XrM=; b=gFsiO3uKBAjfYKW9CmcOU4q9HbHyEo0e6UleFKmLRa5Y/L6JyCQEIoWDptoGldM30C HXI/VbwUiAJlWdtB7tJkl51kGAhb3MV4jNeBc0Ft7THBIc4pBfRYoA80rwCBNGUTttpR dBS9FTu85D4/D6GefT3B1mz9ryLshyLTU0ZqvFNuAEP91O874Jqa9opAXA0lcayFKd/B IvuBtQRlL+RNMfTjlrQ/QlfV3JmnFHWbQomb//bnZgHFMt1K8e0j6Aq4l509qhOcHYbQ ooW0xcYsRi7ieYGl+KfbMUEIRidX3NpAeNxO++txBSLoYE+lHzGC3VZvMwHZBGOx1eQC iuSg== X-Gm-Message-State: AOAM531NrnUl3HfMHmALKEtj7k0eoOQXoPj2qkQ7QFq+5vfwZA9D+D0q Q6MZ0+EwUeqS3MeHgoE2gu3OdaHd/3I= X-Google-Smtp-Source: ABdhPJxMlvUFSBJx34zqzlgApvIT6ipTZ7auVZM9cqrF2EoRJGfwH5OoJbAMmlxo2htJkFowmVJVdg== X-Received: by 2002:a5d:4243:: with SMTP id s3mr12493698wrr.31.1608451124097; Sat, 19 Dec 2020 23:58:44 -0800 (PST) Received: from lili ([2a01:e0a:59b:9120:65d2:2476:f637:db1e]) by smtp.gmail.com with ESMTPSA id g184sm19033498wma.16.2020.12.19.23.58.43 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sat, 19 Dec 2020 23:58:43 -0800 (PST) From: zimoun To: =?utf-8?Q?Bj=C3=B6rn_H=C3=B6fling?= Subject: Re: bug#42405: r-hdf5array fails to build References: <20200717121414.056f6ddf@alma-ubu> <86lffqyxhl.fsf@gmail.com> Date: Sun, 20 Dec 2020 08:55:08 +0100 In-Reply-To: <86lffqyxhl.fsf@gmail.com> (zimoun's message of "Wed, 28 Oct 2020 20:13:58 +0100") Message-ID: <86wnxcrjxf.fsf@gmail.com> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/27.1 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 42405 Cc: 42405@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Hi, >> It is missing the (proprietary) SZIP Compression Library. > > Well, it built fine with 63b75c01c2374edc38437215278f50b617a12c08. And > now using Guix 02c3c51, I get also fine: > > $ guix build r-hdf5array > /gnu/store/qrxrky9jj0mv96yy1875qfwwig7mgsyd-r-hdf5array-1.16.1 > > $ guix build r-hdf5array --no-grafts --check [...] > /gnu/store/w29frb8jpz0w8xkj7p4rxvs7agzqfpvv-r-hdf5array-1.16.1 > > Could you confirm it works for you? If yes, feel free to close the bug? Since it works also with 69b9826 (2020-12-19), substitute available and reproducible build, I am closing. All the best, simon From debbugs-submit-bounces@debbugs.gnu.org Sun Dec 20 02:58:55 2020 Received: (at control) by debbugs.gnu.org; 20 Dec 2020 07:58:55 +0000 Received: from localhost ([127.0.0.1]:43618 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kqtcE-0008Rw-R0 for submit@debbugs.gnu.org; Sun, 20 Dec 2020 02:58:55 -0500 Received: from mail-wr1-f41.google.com ([209.85.221.41]:41315) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kqtcB-0008Ra-1e for control@debbugs.gnu.org; Sun, 20 Dec 2020 02:58:53 -0500 Received: by mail-wr1-f41.google.com with SMTP id a12so7484322wrv.8 for ; Sat, 19 Dec 2020 23:58:50 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=date:message-id:to:from:subject; bh=yoXPW2S2oMK+kQUik9G8fTYNhlhHTxLtQX4EiKiK5hA=; b=aVll6cUytrHetvgNmvxZIob6jiFYD5y2HJl/kvFV6Bq+6GogO7+1BnRR4AROuL3quF 1vkr1tb1YqL7zt1EbneoON8J3kdbH57txVvlc1XITzoY5STsofJx88youYnci8T7xmXZ 87oBN5WqAq4uYGxS9cXGNLkoMhLy1CcA9G3DHrSfimou+ruALbdjwvU+Vj+PbqxtQtX9 T36UugTHrTDg3nq3HyRYAZiqVPKmsh7E939TsQlGQId1Q/594FYIrCNxGWeNTRxHeMjY 1bxJYxrMtROOEeMOURf/2QcU5YQQp0H5Lnhkdu27mR+otobbtQ2hzuIU2TbKBjkGWYnn UI7A== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:date:message-id:to:from:subject; bh=yoXPW2S2oMK+kQUik9G8fTYNhlhHTxLtQX4EiKiK5hA=; b=TaNW9JoD3uS+FdZEPP30FVtySahltp81qz8CxIic1lQLIHwmtHbOh61/QMgsGaNWWj fXAV2aKJGxqy9G3/eZw6r/dEMJiKJRbbgBg1Akte2wqI9NpDG78ID0o7kfy4sAZZRyG9 BcjsqPyvj/asu9T7dOrwtK24ArRRsPrhLPbBlzEP0uRM1MDZGJeOdHMXrAT+m6OtYHNa VlA/ucqwV7Lj6YtHftA88ODfFhygEW4SK87BQcdaRGZXquMPZySk0An+7P7s+SJIlnvD +eiaNzvIbTxrFNP1+l5gYPw3YeV6dfhRpVLq+aItjXqJPRpXgIUTqxHDQ1yRHkX/R5Sg SHPw== X-Gm-Message-State: AOAM533Vg8fFKlcqmUiffpo4NT8L35BD/t0Hdj9CEK+8L72lg1G0R1vc AqC7sx7SrO2Pl3ED/v8D6AtdbT7hjuc= X-Google-Smtp-Source: ABdhPJxzV26B9V78P1l07Co1hn068VU5ZIAaXOcvR9Ulh04hoM1JOsTSlbl70pDZuxKNUD67WVhhYw== X-Received: by 2002:a5d:5604:: with SMTP id l4mr12359937wrv.127.1608451125461; Sat, 19 Dec 2020 23:58:45 -0800 (PST) Received: from lili ([2a01:e0a:59b:9120:65d2:2476:f637:db1e]) by smtp.gmail.com with ESMTPSA id j7sm18424034wmb.40.2020.12.19.23.58.44 for (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sat, 19 Dec 2020 23:58:45 -0800 (PST) Date: Sun, 20 Dec 2020 08:55:28 +0100 Message-Id: <86v9cwrjwv.fsf@gmail.com> To: control@debbugs.gnu.org From: zimoun Subject: control message for bug #42405 X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: control X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) tags 42405 fixed close 42405 quit From unknown Wed Jun 18 00:25:47 2025 Received: (at fakecontrol) by fakecontrolmessage; To: internal_control@debbugs.gnu.org From: Debbugs Internal Request Subject: Internal Control Message-Id: bug archived. Date: Sun, 17 Jan 2021 12:24:04 +0000 User-Agent: Fakemail v42.6.9 # This is a fake control message. # # The action: # bug archived. thanks # This fakemail brought to you by your local debbugs # administrator