GNU bug report logs - #42141
blast+ is not reproducible

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: Ricardo Wurmus <rekado <at> elephly.net>
Subject: bug#42141: closed (Re: bug#42141: blast+ is not reproducible)
Date: Thu, 29 Sep 2022 00:36:02 +0000

[Message part 1 (text/plain, inline)]

Your bug report

#42141: blast+ is not reproducible

which was filed against the guix package, has been closed.

The explanation is attached below, along with your original report.
If you require more details, please reply to 42141 <at> debbugs.gnu.org.

-- 
42141: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=42141
GNU Bug Tracking System
Contact help-debbugs <at> gnu.org with problems

[Message part 2 (message/rfc822, inline)]

From: Maxim Cournoyer <maxim.cournoyer <at> gmail.com>
To: Ricardo Wurmus <rekado <at> elephly.net>
Cc: 42141-done <at> debbugs.gnu.org
Subject: Re: bug#42141: blast+ is not reproducible
Date: Wed, 28 Sep 2022 20:35:41 -0400

Hi,

Ricardo Wurmus <rekado <at> elephly.net> writes:

> This should be rather easy to fix:
>
> diff -r /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include-check
> diff -r /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include-check/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h
> 4,13c4,13
> < #define NCBI_RANDOM_VALUE_0    1770246234u
> < #define NCBI_RANDOM_VALUE_1    2685550394u
> < #define NCBI_RANDOM_VALUE_2    1952513968u
> < #define NCBI_RANDOM_VALUE_3    4081691487u
> < #define NCBI_RANDOM_VALUE_4    1126642990u
> < #define NCBI_RANDOM_VALUE_5    2363626105u
> < #define NCBI_RANDOM_VALUE_6    444644742u
> < #define NCBI_RANDOM_VALUE_7    2799580837u
> < #define NCBI_RANDOM_VALUE_8    216161479u
> < #define NCBI_RANDOM_VALUE_9    992434062u
> ---
>> #define NCBI_RANDOM_VALUE_0    2851596927u
>> #define NCBI_RANDOM_VALUE_1    4039058594u
>> #define NCBI_RANDOM_VALUE_2    3204116600u
>> #define NCBI_RANDOM_VALUE_3    4270143185u
>> #define NCBI_RANDOM_VALUE_4    1366873742u
>> #define NCBI_RANDOM_VALUE_5    703144487u
>> #define NCBI_RANDOM_VALUE_6    2507785646u
>> #define NCBI_RANDOM_VALUE_7    3995716134u
>> #define NCBI_RANDOM_VALUE_8    907933519u
>> #define NCBI_RANDOM_VALUE_9    1149060107u

Not anymore, according to:

--8<---------------cut here---------------start------------->8---
$ guix challenge blast+

1 store items were analyzed:
  - 1 (100.0%) were identical
  - 0 (0.0%) differed
  - 0 (0.0%) were inconclusive
--8<---------------cut here---------------end--------------->8---

That's for blast+ 2.11.0.

Closing!

Maxim

[Message part 3 (message/rfc822, inline)]

From: Ricardo Wurmus <rekado <at> elephly.net>
To: bug-guix <at> gnu.org
Subject: blast+ is not reproducible
Date: Tue, 30 Jun 2020 18:42:04 +0200

This should be rather easy to fix:

--8<---------------cut here---------------start------------->8---
diff -r /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include-check
diff -r /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include-check/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h
4,13c4,13
< #define NCBI_RANDOM_VALUE_0    1770246234u
< #define NCBI_RANDOM_VALUE_1    2685550394u
< #define NCBI_RANDOM_VALUE_2    1952513968u
< #define NCBI_RANDOM_VALUE_3    4081691487u
< #define NCBI_RANDOM_VALUE_4    1126642990u
< #define NCBI_RANDOM_VALUE_5    2363626105u
< #define NCBI_RANDOM_VALUE_6    444644742u
< #define NCBI_RANDOM_VALUE_7    2799580837u
< #define NCBI_RANDOM_VALUE_8    216161479u
< #define NCBI_RANDOM_VALUE_9    992434062u
---
> #define NCBI_RANDOM_VALUE_0    2851596927u
> #define NCBI_RANDOM_VALUE_1    4039058594u
> #define NCBI_RANDOM_VALUE_2    3204116600u
> #define NCBI_RANDOM_VALUE_3    4270143185u
> #define NCBI_RANDOM_VALUE_4    1366873742u
> #define NCBI_RANDOM_VALUE_5    703144487u
> #define NCBI_RANDOM_VALUE_6    2507785646u
> #define NCBI_RANDOM_VALUE_7    3995716134u
> #define NCBI_RANDOM_VALUE_8    907933519u
> #define NCBI_RANDOM_VALUE_9    1149060107u
--8<---------------cut here---------------end--------------->8---

-- 
Ricardo

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