Subject: Re: bug#42141: blast+ is not reproducible

From: Ricardo Wurmus <[email-masked]>
Date: Thu, 29 Sep 2022 11:24:22 +0200

reopen 42141
thanks

Maxim Cournoyer <[email-masked]> writes:

> Hi,
>
> Ricardo Wurmus <[email-masked]> writes:
>
>> This should be rather easy to fix:
>>
>> diff -r
>> /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include
>> /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include-check
>> diff -r
>> /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h
>> /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include-check/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h
>> 4,13c4,13
>> < #define NCBI_RANDOM_VALUE_0    1770246234u
>> < #define NCBI_RANDOM_VALUE_1    2685550394u
>> < #define NCBI_RANDOM_VALUE_2    1952513968u
>> < #define NCBI_RANDOM_VALUE_3    4081691487u
>> < #define NCBI_RANDOM_VALUE_4    1126642990u
>> < #define NCBI_RANDOM_VALUE_5    2363626105u
>> < #define NCBI_RANDOM_VALUE_6    444644742u
>> < #define NCBI_RANDOM_VALUE_7    2799580837u
>> < #define NCBI_RANDOM_VALUE_8    216161479u
>> < #define NCBI_RANDOM_VALUE_9    992434062u
>> ---
>>> #define NCBI_RANDOM_VALUE_0    2851596927u
>>> #define NCBI_RANDOM_VALUE_1    4039058594u
>>> #define NCBI_RANDOM_VALUE_2    3204116600u
>>> #define NCBI_RANDOM_VALUE_3    4270143185u
>>> #define NCBI_RANDOM_VALUE_4    1366873742u
>>> #define NCBI_RANDOM_VALUE_5    703144487u
>>> #define NCBI_RANDOM_VALUE_6    2507785646u
>>> #define NCBI_RANDOM_VALUE_7    3995716134u
>>> #define NCBI_RANDOM_VALUE_8    907933519u
>>> #define NCBI_RANDOM_VALUE_9    1149060107u
>
> Not anymore, according to:
>
> $ guix challenge blast+
>
> 1 store items were analyzed:
>   - 1 (100.0%) were identical
>   - 0 (0.0%) differed
>   - 0 (0.0%) were inconclusive

This is still a problem:

--8<---------------cut here---------------start------------->8---
$ diff -ru /gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include /gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include-check
diff -ru /gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include/include/ncbi-tools++/ncbi-tools++/ncbiconf_unix.h /gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include-check/include/ncbi-tools++/ncbi-tools++/ncbiconf_unix.h
--- /gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include/include/ncbi-tools++/ncbi-tools++/ncbiconf_unix.h	1970-01-01 01:00:01.000000000 +0100
+++ /gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include-check/include/ncbi-tools++/ncbi-tools++/ncbiconf_unix.h	1970-01-01 01:00:01.000000000 +0100
@@ -1095,7 +1095,7 @@
 
 /* Build signature: compiler-name '_' compiler-version '-' configuration '--'
    platform-name '-' hostname */
-#define NCBI_SIGNATURE "GCC_1030-DebugMTDLL64--x86_64-unknown-linux5.15.10-gnu2.33-localhost"
+#define NCBI_SIGNATURE "GCC_1030-DebugMTDLL64--x86_64-unknown-linux5.15.59-gnu2.33-localhost"
 
 /* Define to 1 if SQLColAttribute's last argument is an SQLLEN * */
 #define NCBI_SQLCOLATTRIBUTE_SQLLEN 1
diff -ru /gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h /gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include-check/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h
--- /gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h	1970-01-01 01:00:01.000000000 +0100
+++ /gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include-check/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h	1970-01-01 01:00:01.000000000 +0100
@@ -1,13 +1,13 @@
 #define NCBI_RANDOM_VALUE_TYPE Uint4
 #define NCBI_RANDOM_VALUE_MIN  0
 #define NCBI_RANDOM_VALUE_MAX  0xffffffffu
-#define NCBI_RANDOM_VALUE_0    3249030781u
-#define NCBI_RANDOM_VALUE_1    3573796697u
-#define NCBI_RANDOM_VALUE_2    2130009325u
-#define NCBI_RANDOM_VALUE_3    4284761029u
-#define NCBI_RANDOM_VALUE_4    3467737853u
-#define NCBI_RANDOM_VALUE_5    3267844710u
-#define NCBI_RANDOM_VALUE_6    4107058373u
-#define NCBI_RANDOM_VALUE_7    166436459u
-#define NCBI_RANDOM_VALUE_8    960927418u
-#define NCBI_RANDOM_VALUE_9    3839848519u
+#define NCBI_RANDOM_VALUE_0    2845495105u
+#define NCBI_RANDOM_VALUE_1    2158634051u
+#define NCBI_RANDOM_VALUE_2    4072202242u
+#define NCBI_RANDOM_VALUE_3    902228395u
+#define NCBI_RANDOM_VALUE_4    1353323915u
+#define NCBI_RANDOM_VALUE_5    574823513u
+#define NCBI_RANDOM_VALUE_6    4119501261u
+#define NCBI_RANDOM_VALUE_7    2477640938u
+#define NCBI_RANDOM_VALUE_8    2776595395u
+#define NCBI_RANDOM_VALUE_9    270550684u
--8<---------------cut here---------------end--------------->8---

-- 
Ricardo