From unknown Sat Sep 06 05:55:23 2025 X-Loop: help-debbugs@gnu.org Subject: [bug#42119] [PATCH] gnu: Add r-fhtest and its dependencies Resent-From: Lo Peter Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Mon, 29 Jun 2020 08:03:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 42119 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 42119@debbugs.gnu.org X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.159341778022959 (code B ref -1); Mon, 29 Jun 2020 08:03:02 +0000 Received: (at submit) by debbugs.gnu.org; 29 Jun 2020 08:03:00 +0000 Received: from localhost ([127.0.0.1]:47680 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpokm-0005yE-I9 for submit@debbugs.gnu.org; Mon, 29 Jun 2020 04:03:00 -0400 Received: from lists.gnu.org ([209.51.188.17]:34002) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpokg-0005y1-Qr for submit@debbugs.gnu.org; Mon, 29 Jun 2020 04:02:58 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:45442) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1jpoke-0004NK-NE for guix-patches@gnu.org; Mon, 29 Jun 2020 04:02:52 -0400 Received: from mail-lf1-x133.google.com ([2a00:1450:4864:20::133]:35089) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1jpokd-0008IF-1O for guix-patches@gnu.org; Mon, 29 Jun 2020 04:02:52 -0400 Received: by mail-lf1-x133.google.com with SMTP id t74so8561928lff.2 for ; Mon, 29 Jun 2020 01:02:50 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=mime-version:from:date:message-id:subject:to; bh=3PmuA3BsqEiNod4H2w2kDFBuxwdfHtNjebhlLpcvCzQ=; b=Q76Y9lP6ZUSNw+N/tAF/Sr6jAxTDrYRqZ9LDY2/Bj/Jw1i1lc8pyzYEC16jb+S4IMS zQe/aVFMyEXLKJeAlhtjuDjxsle8ywxjjHsOCJl79nG1Z++sCnO59b+LtyiS0nc3IBhd 2QmKWN756z4Ms48Ae/S9H4C5svBJC248W+gWpwEqNTRTiReomLgIoVdWUuayaEt7xzst 454cBW8xVqt7AfFPC+xiifYSH/7ocKTu2Ifk0Cb+m6LQsAotMph0Iz9d43ecF18Zz+91 yQgxA0JmM5TTAxBU6zffv77TLji2vURdZ49TjNkGfIzfMj/PwA4GQq8i7ADNecgYmWXm rjKg== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:mime-version:from:date:message-id:subject:to; bh=3PmuA3BsqEiNod4H2w2kDFBuxwdfHtNjebhlLpcvCzQ=; b=VoP94qSSnPfdR/C6Il11sX+aUcR9w7TnuG6MaKL76Ddj8ub+JwsTpLU+hxk+LHMC6w spfdpRa985GCdQctsNsmOudOtUVSARHpP7Rrba4YRzxPhaULxA6U30EE1dji96G+xZx6 bjNOcZOcMNuHmv9cRUYK7gqtfWOAknXTMpQwKQTyO5oOruCentCDLBrnwT6cbjm8Nep3 C4qO7YIyBP5vCHbtzCphI2lcciFLk+jRFfh1nJ2Teu784OMVXTPLlajy+bUcXcG8Y8UP Fv7GlWI34Eq9IPmbXyr0glQK1NwoEu0scwRlrdkJdeiZ7rb+wNdrUtInhtO9YEYglvzN 615Q== X-Gm-Message-State: AOAM530TQpyhpb20zjZ5CdSebyz5KVotEUu50rac1JpA7VlqrF1CJJSU Ub36HeZrOfhWomleYE+TxKeNmjnBK2BK75vFoiQoJkf+ X-Google-Smtp-Source: ABdhPJzPqDY0FQ23yZjDWWWWtHm+idLZB87o0hJQq9XCFixmTrZDC3hw+1HSWtN1gFx+Lu5hyEUNYl0cztrtCs44n6U= X-Received: by 2002:ac2:4c03:: with SMTP id t3mr8431343lfq.72.1593417768610; Mon, 29 Jun 2020 01:02:48 -0700 (PDT) MIME-Version: 1.0 From: Lo Peter Date: Mon, 29 Jun 2020 16:02:36 +0800 Message-ID: Content-Type: text/plain; charset="UTF-8" Received-SPF: pass client-ip=2a00:1450:4864:20::133; envelope-from=peterloleungyau@gmail.com; helo=mail-lf1-x133.google.com X-detected-operating-system: by eggs.gnu.org: No matching host in p0f cache. That's all we know. X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=_AUTOLEARN X-Spam_action: no action X-Spam-Score: 0.7 (/) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.3 (--) Dear all, I am submitting a patch series for r-fhtest and its dependencies. Note that one of its dependency r-kmsurv is not included here, because I previously submitted its patch in patch 2 of bug#42107. Regards, Peter From unknown Sat Sep 06 05:55:23 2025 X-Loop: help-debbugs@gnu.org Subject: [bug#42119] [PATCH 1/5] gnu: Add r-icens. References: In-Reply-To: Resent-From: Peter Lo Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Mon, 29 Jun 2020 08:04:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 42119 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 42119@debbugs.gnu.org Cc: Peter Lo Received: via spool by 42119-submit@debbugs.gnu.org id=B42119.159341783423089 (code B ref 42119); Mon, 29 Jun 2020 08:04:01 +0000 Received: (at 42119) by debbugs.gnu.org; 29 Jun 2020 08:03:54 +0000 Received: from localhost ([127.0.0.1]:47688 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpold-00060L-RO for submit@debbugs.gnu.org; Mon, 29 Jun 2020 04:03:54 -0400 Received: from mail-pl1-f175.google.com ([209.85.214.175]:40535) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpolb-000603-5p for 42119@debbugs.gnu.org; Mon, 29 Jun 2020 04:03:53 -0400 Received: by mail-pl1-f175.google.com with SMTP id x11so6788432plo.7 for <42119@debbugs.gnu.org>; Mon, 29 Jun 2020 01:03:51 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id; bh=73OxJO1NI7F65HaAjp/GsKX2YsvPL2JLoFPF1KRWry0=; b=q9pfPOpS/Hm+UphddwsW/VQDAqt0JJmZn+/jCfpeL6h4jf7alkiWQUS2n/AIMA+Dzj g6Q7atjU6K9c5JH284veoN6DPFZuSQaGqYZR9nb017fnsoBoP8ahi8sJ2q4i4U12XAZn cCfbshA6M3qI0DAlhyXxyA8jYeV0UyjTuMSqCoJFcesPBTvenaDCun6CEU4CV0R3/j33 atUU18Tc8rp6V1OcapaGbGsDFF9XT+eXp9Lq2C/5IA9EJ3gqDA8aiIQ0dHqNvQKIDhRs 0z34AMQm2+dRxjKyuqBePqjAEzAq/RrgPxT4zoGYjRCCTH2m+ITVnV7Ix08M5ecHlZWI VGbg== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id; bh=73OxJO1NI7F65HaAjp/GsKX2YsvPL2JLoFPF1KRWry0=; b=NwlFrAc3dSAsbdPc8xTFAZTBYAg6flViLC04yaiv5eYv0x9WUr3/psZ6eNzFLQ/pvU +BRSfwjyzLAKLZxoybFgjIVwm4AiPHflJY3dsfcDFDsVLEDsfq1Cd49iidEPUalWLyEv XlJo05Zrns45XRu+ovjQDnUyQx57SGyndL0/7t/p2gS1e8XEaWNZ5FJbcys7KvZHsZsy UOP19xM87UOwGduU5zLkQH+g4p44umoE+fxGtW5//Q+uasnLPJ6JFZsBz1AeFNlgifTr T2ST5eRjXI5BzFs0Pyqoxa+bEZbXogptobZpcZY/zTtPqs1Gy/jplCefLhcGDX8Zppb8 JonA== X-Gm-Message-State: AOAM531I958iY8iVepZDWUjXR0Am7UC9YRb2m0t3vEuDxEdK3L2H2Tex hj0MYBRVXLDlrzjRUayhFubl4sjT3Os= X-Google-Smtp-Source: ABdhPJzZxldgMmEWPXJyS8TXYY53Ai0hX/xrI/6LhjFGgfgkpupu5oLYq9/50/pNpEJi87hupcVcmg== X-Received: by 2002:a17:902:b196:: with SMTP id s22mr12699502plr.152.1593417824811; Mon, 29 Jun 2020 01:03:44 -0700 (PDT) Received: from localhost.localdomain (059149170072.ctinets.com. [59.149.170.72]) by smtp.gmail.com with ESMTPSA id d37sm2561459pgd.18.2020.06.29.01.03.43 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Mon, 29 Jun 2020 01:03:44 -0700 (PDT) From: Peter Lo Date: Mon, 29 Jun 2020 16:03:36 +0800 Message-Id: <20200629080340.13200-1-peterloleungyau@gmail.com> X-Mailer: git-send-email 2.17.1 X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/bioconductor.scm (r-icens): New variable. --- gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 002f4a0edb..763c219d9e 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -8117,3 +8117,26 @@ dimensional mass cytometry data.") Tool) analysis automatic by constructing a HTTP POST request according to user's input and automatically retrieving results from GREAT web server.") (license license:expat))) + +(define-public r-icens + (package + (name "r-icens") + (version "1.60.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "Icens" version)) + (sha256 + (base32 + "0fh7wgkrw20f61p06i87nccnbig9wv4m0jcg7cx1rw7g2ndnabgp")))) + (properties `((upstream-name . "Icens"))) + (build-system r-build-system) + (propagated-inputs `(("r-survival" ,r-survival))) + (home-page + "https://bioconductor.org/packages/release/bioc/html/Icens.html") + (synopsis + "NPMLE for Censored and Truncated Data") + (description + "Many functions for computing the NPMLE for censored and +truncated data.") + (license license:artistic2.0))) -- 2.17.1 From unknown Sat Sep 06 05:55:23 2025 X-Loop: help-debbugs@gnu.org Subject: [bug#42119] [PATCH 2/5] gnu: Add r-mlecens. Resent-From: Peter Lo Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Mon, 29 Jun 2020 08:04:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 42119 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 42119@debbugs.gnu.org Cc: Peter Lo Received: via spool by 42119-submit@debbugs.gnu.org id=B42119.159341783823118 (code B ref 42119); Mon, 29 Jun 2020 08:04:02 +0000 Received: (at 42119) by debbugs.gnu.org; 29 Jun 2020 08:03:58 +0000 Received: from localhost ([127.0.0.1]:47692 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpoli-00060j-1Q for submit@debbugs.gnu.org; Mon, 29 Jun 2020 04:03:58 -0400 Received: from mail-pj1-f44.google.com ([209.85.216.44]:51877) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpold-000606-4L for 42119@debbugs.gnu.org; Mon, 29 Jun 2020 04:03:54 -0400 Received: by mail-pj1-f44.google.com with SMTP id l6so4639582pjq.1 for <42119@debbugs.gnu.org>; Mon, 29 Jun 2020 01:03:53 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references; bh=R36BAp4B126U7mE8s4O3c20nmAR9CWZJI5lbQ6X5fGs=; b=U2vG6XgVdjaC+nJJe4f+XZd8kY3UkBWpLI7zML/hNUDmiwgu1FnWf0Gqu1sfP0kh3p zkSZjicC+WHKvU4kns9e3uw1qFP/Pm9iUvN7S+gJ50/VLxGCFy1ok2FVbS11SiAXnCAi 7w1XAFS1AWsIfhoTyfHmcc51IXU5OqouHA16TOeVImDHL4QyWQovAz6h7M39ruMTnhEG NclYLb7E6rlFc980pJik83YQTmrb/V3ime6oTpZ33wfDMZWu+yP4K4XZqmhAhgTf6mw7 xqyh8DxvCDNonFrxeu0Aj8BUVuF47vdRwQFz9+p++0m+gFOp4WRL5i5zgmzQykWQ6BXA 6GJw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references; bh=R36BAp4B126U7mE8s4O3c20nmAR9CWZJI5lbQ6X5fGs=; b=RM/TMZ+3Kn+KUkMaJZlJaGfz2Qqrv2GnsKBGKOL99YHBTD9uBYXK/8FlWQponlYXhh OeB1/RbVIF2PJPtqH/WuQfq3hb/dpAX4revDXK6AFtgzNANOyNE145cyCpZ6z/Y6EMfb jGvklVp2iUWVJQaLHziThFdqCyPTwS4edMeS9gzzEjDXsJNRiv88dvLSmqLK1qag41/j rl8xgazMXsn93YC7kYZTOlTCrjAeNCTT1ETxveXs1GWZvqszcY0OU7npy0FH/3ci1lti gOhMEbNrhjeotvoeJdeOLSNv46Y3+XHW6YKYvt03eOOhGXKf5pQSILuimJ6zaPwm/465 AXVA== X-Gm-Message-State: AOAM530XpA1U/Uf8/NsItiyizggT1ycZ/Lx0e05xm9jteoheKf/ZLM/Y AqWQ1jcujvQQ/asfMW0Tgpeu+8AvMfU= X-Google-Smtp-Source: ABdhPJw6Bddv/WUH3ITl4nmxuqm1KNOnzSfXTmaHZDbTh19lNpTqWKxe6b151bt82lLzUjWKNXM0fw== X-Received: by 2002:a17:90b:1881:: with SMTP id mn1mr14702440pjb.198.1593417826676; Mon, 29 Jun 2020 01:03:46 -0700 (PDT) Received: from localhost.localdomain (059149170072.ctinets.com. [59.149.170.72]) by smtp.gmail.com with ESMTPSA id d37sm2561459pgd.18.2020.06.29.01.03.45 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Mon, 29 Jun 2020 01:03:45 -0700 (PDT) From: Peter Lo Date: Mon, 29 Jun 2020 16:03:37 +0800 Message-Id: <20200629080340.13200-2-peterloleungyau@gmail.com> X-Mailer: git-send-email 2.17.1 In-Reply-To: <20200629080340.13200-1-peterloleungyau@gmail.com> References: <20200629080340.13200-1-peterloleungyau@gmail.com> X-Spam-Score: -0.0 (/) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/cran.scm (r-mlecens): New variable. --- gnu/packages/cran.scm | 29 +++++++++++++++++++++++++++++ 1 file changed, 29 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index ab5e57c0e2..8be110a9bd 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22325,3 +22325,32 @@ across a wide array of bioinformatic R packages.") and clustering large sequence datasets using fast alignment-free k-mer counting and recursive k-means partitioning.") (license license:gpl3))) + +(define-public r-mlecens + (package + (name "r-mlecens") + (version "0.1-4") + (source + (origin + (method url-fetch) + (uri (cran-uri "MLEcens" version)) + (sha256 + (base32 + "0zlmrcjraypscgs2v0w4s4hm7qccsmaz4hjsgqpn0058vx622945")))) + (properties `((upstream-name . "MLEcens"))) + (build-system r-build-system) + (home-page "http://stat.ethz.ch/~maathuis/") + (synopsis + "Computation of the MLE for bivariate (interval) censored data") + (description + "This package contains functions to compute the nonparametric +maximum likelihood estimator (MLE) for the bivariate distribution +of (X,Y), when realizations of (X,Y) cannot be observed directly. To +be more precise, we consider the situation where we observe a set of +rectangles that are known to contain the unobservable realizations +of (X,Y). We compute the MLE based on such a set of rectangles. The +methods can also be used for univariate censored data (see data set +@code{cosmesis}), and for censored data with competing risks (see data +set @code{menopause}). We also provide functions to visualize the +observed data and the MLE.") + (license license:gpl2+))) -- 2.17.1 From unknown Sat Sep 06 05:55:23 2025 X-Loop: help-debbugs@gnu.org Subject: [bug#42119] [PATCH 3/5] gnu: Add r-perm. Resent-From: Peter Lo Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Mon, 29 Jun 2020 08:04:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 42119 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 42119@debbugs.gnu.org Cc: Peter Lo Received: via spool by 42119-submit@debbugs.gnu.org id=B42119.159341784023133 (code B ref 42119); Mon, 29 Jun 2020 08:04:02 +0000 Received: (at 42119) by debbugs.gnu.org; 29 Jun 2020 08:04:00 +0000 Received: from localhost ([127.0.0.1]:47695 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpolk-000612-BZ for submit@debbugs.gnu.org; Mon, 29 Jun 2020 04:04:00 -0400 Received: from mail-pj1-f47.google.com ([209.85.216.47]:35579) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpole-000608-Tv for 42119@debbugs.gnu.org; Mon, 29 Jun 2020 04:03:57 -0400 Received: by mail-pj1-f47.google.com with SMTP id i4so7695341pjd.0 for <42119@debbugs.gnu.org>; Mon, 29 Jun 2020 01:03:54 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references; bh=okCwsX4mhlhmNcPmGzNBTMx3lsMaerd7HScndADU1dw=; b=typtG0mryTQci0/Fe8SXcQdh3+piDcE/oAOiLxQqyium68541d7mMfMCRblhGVXugN wJ3NVoWxfZyWRQA87EXHNOiJ8b8XafZuJ25LGNAyZSgCwKEmCyv6PMedQwLfFKGfAbzs gDNQj/82mBJC9FE9ZgYhRnSzjA7ApzUQVHPFCfPdYEN7QoSntq6MZXbDe38fGKcPCdxg q84+SXWLifXtWCAqU2FM+36lt4i00rL3mUTidaTkBXo7y1BQ+Ogq0m4+bs+TIjA4uEC0 GPPYAu32uAIgfQEPxM3vBzTa5bTVZYibE7SHtAEtGUACYooXDDlYHrTv/AApdDmMDbBJ cujA== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references; bh=okCwsX4mhlhmNcPmGzNBTMx3lsMaerd7HScndADU1dw=; b=K9wIXC+JbSpRRiV46d0WG89lhcNja/fpeuaRBMyfp6oPAtEVrk7EkuPox/nrODYNuB WYZH2kRbfBPEaaGSMV/W4EURPmSaR20pX9U2xm7pFznf21ps0Qa1pc8mIHti1K/aTEZQ /5KUhfUTyjs5cT+OJ+VIILsCDzuDgdPYR0cQos3cCGc0+XIAZgRJxExdN/4MQDLF2lrw x3AE0bMfRBSUnHCkVwwAKVANObhaR/v/WnFCd3SA+LG1qXKlh/UiJQNrbYDsvIpmO3mf OGLvGdmKH1WkIjrRgzp5a/ffzjmVLzMM2l5w8Z+YW8UdqyJZMgycXIhNy/TpmbWLIscY lpJg== X-Gm-Message-State: AOAM5334bifCLGBX8uO0r5W2eT1n8PXTYGeKQUYy3vP6tJtL+84Il+9y rpZsuXEiHHYzcDkdVJxjAh16O7Mmm9U= X-Google-Smtp-Source: ABdhPJzpa+g6mCsXDQVYK5oG/qlXMxSnWmUvfp+xio42IOG3TOva6Rzlrpw9aWnXVfHks25bKeREpw== X-Received: by 2002:a17:902:9a4b:: with SMTP id x11mr5165587plv.150.1593417828459; Mon, 29 Jun 2020 01:03:48 -0700 (PDT) Received: from localhost.localdomain (059149170072.ctinets.com. [59.149.170.72]) by smtp.gmail.com with ESMTPSA id d37sm2561459pgd.18.2020.06.29.01.03.46 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Mon, 29 Jun 2020 01:03:47 -0700 (PDT) From: Peter Lo Date: Mon, 29 Jun 2020 16:03:38 +0800 Message-Id: <20200629080340.13200-3-peterloleungyau@gmail.com> X-Mailer: git-send-email 2.17.1 In-Reply-To: <20200629080340.13200-1-peterloleungyau@gmail.com> References: <20200629080340.13200-1-peterloleungyau@gmail.com> X-Spam-Score: -0.0 (/) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/cran.scm (r-perm): New variable. --- gnu/packages/cran.scm | 21 +++++++++++++++++++++ 1 file changed, 21 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 8be110a9bd..fe1a8e0b46 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22354,3 +22354,24 @@ methods can also be used for univariate censored data (see data set set @code{menopause}). We also provide functions to visualize the observed data and the MLE.") (license license:gpl2+))) + +(define-public r-perm + (package + (name "r-perm") + (version "1.0-0.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "perm" version)) + (sha256 + (base32 + "0075awl66ynv10vypg63fcxk33qzvxddrp8mi4w08ysvimcyxijk")))) + (properties `((upstream-name . "perm"))) + (build-system r-build-system) + (home-page + "https://cran.r-project.org/web/packages/perm/") + (synopsis + "Exact or Asymptotic permutation tests") + (description + "Perform Exact or Asymptotic permutation tests") + (license (list license:gpl2+ license:gpl3+)))) -- 2.17.1 From unknown Sat Sep 06 05:55:23 2025 X-Loop: help-debbugs@gnu.org Subject: [bug#42119] [PATCH 4/5] gnu: Add r-interval. Resent-From: Peter Lo Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Mon, 29 Jun 2020 08:04:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 42119 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 42119@debbugs.gnu.org Cc: Peter Lo Received: via spool by 42119-submit@debbugs.gnu.org id=B42119.159341784123141 (code B ref 42119); Mon, 29 Jun 2020 08:04:03 +0000 Received: (at 42119) by debbugs.gnu.org; 29 Jun 2020 08:04:01 +0000 Received: from localhost ([127.0.0.1]:47697 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpolk-000614-Kv for submit@debbugs.gnu.org; Mon, 29 Jun 2020 04:04:00 -0400 Received: from mail-pg1-f176.google.com ([209.85.215.176]:37044) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpolh-00060D-7m for 42119@debbugs.gnu.org; Mon, 29 Jun 2020 04:03:58 -0400 Received: by mail-pg1-f176.google.com with SMTP id d4so7942824pgk.4 for <42119@debbugs.gnu.org>; Mon, 29 Jun 2020 01:03:57 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references; bh=2DPLbciOkU6wAokQaWSZWgb5qx0DUR5Z9l9FLJlBeHw=; b=TLMCuRoCQqE19+4x/yZiT3yb58immLOTEmdYVEtfcHxg2r9ArNH7+TlwZIvKXVK4KR XzHRuncXWplpHpidStFgeIeMlVyGrWe/UJZ0p7NjB17dIbvTl2L4TsArSY1DQ9y0SoRG /y2toi5EMWCx0qSpsFzeTNivgUt8PpW2pS4b6A+h42rZMx52yCkpFyMsfveaXUPvNP/E RUJpKxV4r+Cykhs4+1n9MdOoIO6XoFTgrm7SPtdOtUHS15sA0sImsq0hcgUGBdjFQr2i mSeBkREB2d1ODfLel0XRz09oWDiUxFsyzQ4z1lUIOMl94U6/r8n1aqKAhASOo5HSMv50 C6jA== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references; bh=2DPLbciOkU6wAokQaWSZWgb5qx0DUR5Z9l9FLJlBeHw=; b=dE0uVXfCrW7K+Qcm5EgTwTEixXJ851e0E8AgjjvajZZZW5yMdZcC0uLHhxIOoimvxF TlxdXe+KGU+akWOv+aI3kYiAcTVKCneSgU+BhEnsjjavgy9jaKV69+MEjc5Da/oAwSFb f2Xk0yj14hZnxDsY9dSMFKLIsYfvGA/s85h4UEbJ636RPTTWwuB+ZFaEf5o5F8cTVU9w jY04OnoVG0ZWTjJNKF8a2ARkJRLPXhfBs4TeXar30zFFQWLKz3Eay3ROAKvC9vHPhrj0 zFG064wZ+3GA3WSt5yxMrnZem3pcPJQKZxRYBs2TgTgP4cNIVAYB66RdS9V+XrEg4QTQ ygIQ== X-Gm-Message-State: AOAM530KHpaeYAZ3dkkk3Ctba/kMbsMvfg8MIJNmjCBEysF7K84XrxGj hC5njCObJQVbZgZuUNOB0RZfEaHvKLM= X-Google-Smtp-Source: ABdhPJxIPw5fBpc9aAWsXAXtkRciUoQT8dfabh9yAdZSsgSwAnXxSZh9dweYpBVFNUjYaUX4WNDL1Q== X-Received: by 2002:a62:81c4:: with SMTP id t187mr13916194pfd.287.1593417830854; Mon, 29 Jun 2020 01:03:50 -0700 (PDT) Received: from localhost.localdomain (059149170072.ctinets.com. [59.149.170.72]) by smtp.gmail.com with ESMTPSA id d37sm2561459pgd.18.2020.06.29.01.03.48 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Mon, 29 Jun 2020 01:03:49 -0700 (PDT) From: Peter Lo Date: Mon, 29 Jun 2020 16:03:39 +0800 Message-Id: <20200629080340.13200-4-peterloleungyau@gmail.com> X-Mailer: git-send-email 2.17.1 In-Reply-To: <20200629080340.13200-1-peterloleungyau@gmail.com> References: <20200629080340.13200-1-peterloleungyau@gmail.com> X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/cran.scm (r-interval): New variable. --- gnu/packages/cran.scm | 27 +++++++++++++++++++++++++++ 1 file changed, 27 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index fe1a8e0b46..d3cd199130 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22375,3 +22375,30 @@ observed data and the MLE.") (description "Perform Exact or Asymptotic permutation tests") (license (list license:gpl2+ license:gpl3+)))) + +(define-public r-interval + (package + (name "r-interval") + (version "1.1-0.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "interval" version)) + (sha256 + (base32 + "1lln9jkli28i4wivwzqrsxvv2n15560f7msjy5gssrm45vxrxms8")))) + (properties `((upstream-name . "interval"))) + (build-system r-build-system) + (propagated-inputs + `(("r-icens" ,r-icens) + ("r-mlecens" ,r-mlecens) + ("r-perm" ,r-perm) + ("r-survival" ,r-survival))) + (home-page + "https://cran.r-project.org/web/packages/interval/") + (synopsis + "Weighted Logrank Tests and NPMLE for interval censored data") + (description + "This package provides functions to fit nonparametric survival +curves, plot them, and perform logrank or Wilcoxon type tests.") + (license license:gpl2+))) -- 2.17.1 From unknown Sat Sep 06 05:55:23 2025 X-Loop: help-debbugs@gnu.org Subject: [bug#42119] [PATCH 5/5] gnu: Add r-fhtest. Resent-From: Peter Lo Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Mon, 29 Jun 2020 08:04:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 42119 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 42119@debbugs.gnu.org Cc: Peter Lo Received: via spool by 42119-submit@debbugs.gnu.org id=B42119.159341784123147 (code B ref 42119); Mon, 29 Jun 2020 08:04:03 +0000 Received: (at 42119) by debbugs.gnu.org; 29 Jun 2020 08:04:01 +0000 Received: from localhost ([127.0.0.1]:47699 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpolk-00061C-Ua for submit@debbugs.gnu.org; Mon, 29 Jun 2020 04:04:01 -0400 Received: from mail-pj1-f44.google.com ([209.85.216.44]:34689) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpoli-00060K-Hs for 42119@debbugs.gnu.org; Mon, 29 Jun 2020 04:03:58 -0400 Received: by mail-pj1-f44.google.com with SMTP id cv18so2897174pjb.1 for <42119@debbugs.gnu.org>; Mon, 29 Jun 2020 01:03:58 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references; bh=5Jr3p4u16WaJ4u2DSqdyyXxmXdaoyaEUTaRQpzcQI5A=; b=si9FCMnK1nLxnM3BQF0QZ1/kHSuJ19g9NUHfv+WIHhiBTQgAw1GSlSHISeOrmJQEs6 Lc4CAeaQO+qzAwUm1U/fKGTZbbW/0qHybydIfzl17hccZGcFiQnxRZ22LhExbYqrk/fs kKYRWdV117bTeTpxEIZDyCgvQPyZxn4QLFubbvOfbd0OzLD77f31pegQqPhl72vy+yhi iPggdxspl+RdZqfLyy5RZfiZekfrREU8pXVuSOIw+wvyj8KNfcOlPoY+11kZ/lF07H0r AbVnpPnq/ez8DXeOj60mumTXbQY8pLcH+/BFoDoA9q8huqeUsdaVkHNbAkRHh2YhuHZJ aGaQ== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references; bh=5Jr3p4u16WaJ4u2DSqdyyXxmXdaoyaEUTaRQpzcQI5A=; b=h+UtoC8rz++/c6JUNq/BE+8YQ8xWmvlVWSrJ9RBEmVqp6V/TvyDRaOzPe3arvDFply ZPyQB+420aubS4ZBgsg3P67cWvuBjMR8K/RNOvG6V5a4c2F/oiXik0V5byl21d9eyBTd MFi71buyA8FwCV0a8irXI+r0Ccu77u94qXQabkVDtnbyOLVTX6DbkU6GsXRwDKtzQBTR YysR7oeAKgx7x6IEDf0KKd66DBXnMlKjZ4Gounx6dQ5iqyJCOD8ETuxjq9brAwslSgMI T8HQBlg5VQHE1LWIwQWDZLgfcmuVYekNjdLj/K5CKFPmlmsL4V428C/7iTt+RWNpaowi j6Ww== X-Gm-Message-State: AOAM530fwfiH1celmQEIttuzmqNXRG+P3250MWICb4lpSLkpxQmNwxWf QEXck4C43Jy2FC8B7DoQGFkd869/auQ= X-Google-Smtp-Source: ABdhPJxIod6uNIBYPQ345qVnUFeiVN5suiWE2V1szuUifFw8q2VTQU8vzpsZMp0Z2wB81hCG999IUQ== X-Received: by 2002:a17:902:8342:: with SMTP id z2mr12543020pln.300.1593417832489; Mon, 29 Jun 2020 01:03:52 -0700 (PDT) Received: from localhost.localdomain (059149170072.ctinets.com. [59.149.170.72]) by smtp.gmail.com with ESMTPSA id d37sm2561459pgd.18.2020.06.29.01.03.51 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Mon, 29 Jun 2020 01:03:51 -0700 (PDT) From: Peter Lo Date: Mon, 29 Jun 2020 16:03:40 +0800 Message-Id: <20200629080340.13200-5-peterloleungyau@gmail.com> X-Mailer: git-send-email 2.17.1 In-Reply-To: <20200629080340.13200-1-peterloleungyau@gmail.com> References: <20200629080340.13200-1-peterloleungyau@gmail.com> X-Spam-Score: -0.0 (/) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/cran.scm (r-fhtest): New variable. --- gnu/packages/cran.scm | 31 +++++++++++++++++++++++++++++++ 1 file changed, 31 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index d3cd199130..3d02139f87 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22402,3 +22402,34 @@ observed data and the MLE.") "This package provides functions to fit nonparametric survival curves, plot them, and perform logrank or Wilcoxon type tests.") (license license:gpl2+))) + +(define-public r-fhtest + (package + (name "r-fhtest") + (version "1.4") + (source + (origin + (method url-fetch) + (uri (cran-uri "FHtest" version)) + (sha256 + (base32 + "1wsn0j9ydpp9nfswiqg21p09kgkvaq8fh0y0h8syqgizah7i8vs2")))) + (properties `((upstream-name . "FHtest"))) + (build-system r-build-system) + (propagated-inputs + `(("r-interval" ,r-interval) + ("r-kmsurv" ,r-kmsurv) + ("r-mass" ,r-mass) + ("r-perm" ,r-perm) + ("r-survival" ,r-survival))) + (home-page + "https://cran.r-project.org/web/packages/FHtest/") + (synopsis + "Tests for Survival Data Based on the Fleming-Harrington Class") + (description + "This package provides functions to compare two or more survival +curves with: a) The Fleming-Harrington test for right-censored data +based on permutations and on counting processes. b) An extension of +the Fleming-Harrington test for interval-censored data based on a +permutation distribution and on a score vector distribution.") + (license license:gpl2+))) -- 2.17.1 From unknown Sat Sep 06 05:55:23 2025 MIME-Version: 1.0 X-Mailer: MIME-tools 5.505 (Entity 5.505) X-Loop: help-debbugs@gnu.org From: help-debbugs@gnu.org (GNU bug Tracking System) To: Lo Peter Subject: bug#42119: closed (Re: [bug#42119] [PATCH] gnu: Add r-fhtest and its dependencies) Message-ID: References: <87lfhg14wt.fsf@elephly.net> X-Gnu-PR-Message: they-closed 42119 X-Gnu-PR-Package: guix-patches X-Gnu-PR-Keywords: patch Reply-To: 42119@debbugs.gnu.org Date: Fri, 11 Sep 2020 19:36:01 +0000 Content-Type: multipart/mixed; boundary="----------=_1599852961-29007-1" This is a multi-part message in MIME format... ------------=_1599852961-29007-1 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable Content-Type: text/plain; charset="utf-8" Your bug report #42119: [PATCH] gnu: Add r-fhtest and its dependencies which was filed against the guix-patches package, has been closed. The explanation is attached below, along with your original report. If you require more details, please reply to 42119@debbugs.gnu.org. --=20 42119: http://debbugs.gnu.org/cgi/bugreport.cgi?bug=3D42119 GNU Bug Tracking System Contact help-debbugs@gnu.org with problems ------------=_1599852961-29007-1 Content-Type: message/rfc822 Content-Disposition: inline Content-Transfer-Encoding: 7bit Received: (at 42119-done) by debbugs.gnu.org; 11 Sep 2020 19:35:59 +0000 Received: from localhost ([127.0.0.1]:45599 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kGopz-0007Xd-9I for submit@debbugs.gnu.org; Fri, 11 Sep 2020 15:35:59 -0400 Received: from sender4-of-o51.zoho.com ([136.143.188.51]:21132) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kGopw-0007XJ-RV for 42119-done@debbugs.gnu.org; Fri, 11 Sep 2020 15:35:58 -0400 ARC-Seal: i=1; a=rsa-sha256; t=1599852954; cv=none; d=zohomail.com; s=zohoarc; b=OSrjTF2OhlcFZASdnjBgSirOv6Fetc1WMB9drF8iZOylv47Zy1S6ywvaIhYQPtcmhyspnehODsll0coN3SnhABE/HtVXN3QQZk5gF/ZZ7G6MzTZblOCezc6n2EZRQ/lX/wb3FKE3+xk2irhS8O0Fig/EY4h27ab1e3ZCFmOVRUs= ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=zohomail.com; s=zohoarc; t=1599852954; h=Content-Type:Content-Transfer-Encoding:Cc:Date:From:In-Reply-To:MIME-Version:Message-ID:References:Subject:To; bh=3z4ByNeRFvaFAzOlQDb91flXHF7p6M5y/TbvuTNo1wk=; b=JpnCgHj82aaZqTPkbheFMr6NAiD6M7RrKX08Q85WQSBzvs+QKomHikZv5uMKLS0NK0OHz9Sc9nV48X0PbIGAnm8td4lBG7gEGWvVCZwa8Qy3EUhAGVderztwWzzh9HmwqSsqMLxpTglhwiEY0HW1TkehoaNB/fchoHfWjU+nLjI= ARC-Authentication-Results: i=1; mx.zohomail.com; dkim=pass header.i=elephly.net; spf=pass smtp.mailfrom=rekado@elephly.net; dmarc=pass header.from= header.from= DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; t=1599852954; s=zoho; d=elephly.net; i=rekado@elephly.net; h=References:From:To:Cc:Subject:In-reply-to:Date:Message-ID:MIME-Version:Content-Type:Content-Transfer-Encoding; bh=3z4ByNeRFvaFAzOlQDb91flXHF7p6M5y/TbvuTNo1wk=; b=GqbmL8Cs0VcykVVYvYSdwY7gGaNS1CVKdJnER3T/mDRUyyt5qkTxWJZmFbltIdLb RHey/mqKtcKVoUPUIkBj4xQ+R1/uuwx1UAunNAISryOR6r/aDdrGEGTlcQmUEmnONVL FA7ht/nVo3g0taHLGFQItVtpFx2FS1jnAe1L1cj4= Received: from localhost (p54ad420a.dip0.t-ipconnect.de [84.173.66.10]) by mx.zohomail.com with SMTPS id 1599852952957182.8812878527824; Fri, 11 Sep 2020 12:35:52 -0700 (PDT) References: User-agent: mu4e 1.4.13; emacs 27.1 From: Ricardo Wurmus To: Lo Peter Subject: Re: [bug#42119] [PATCH] gnu: Add r-fhtest and its dependencies In-reply-to: X-URL: https://elephly.net X-PGP-Key: https://elephly.net/rekado.pubkey X-PGP-Fingerprint: BCA6 89B6 3655 3801 C3C6 2150 197A 5888 235F ACAC Date: Fri, 11 Sep 2020 21:37:06 +0200 Message-ID: <87lfhg14wt.fsf@elephly.net> MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-ZohoMailClient: External X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 42119-done Cc: 42119-done@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Hi Peter, > I am submitting a patch series for r-fhtest and its dependencies. > Note that one of its dependency r-kmsurv is not included here, because > I previously submitted its patch in patch 2 of bug#42107. Thank you for this patch set. I moved r-fhtest and r-interval to (gnu packages bioconductor) because they (untypically for CRAN packages) depend on Bioconductor things. I heavily edited the description and synopses and pushed everything to the =E2=80=9Cmaster=E2=80=9D branch with commit 7e88ee9f02. --=20 Ricardo ------------=_1599852961-29007-1 Content-Type: message/rfc822 Content-Disposition: inline Content-Transfer-Encoding: 7bit Received: (at submit) by debbugs.gnu.org; 29 Jun 2020 08:03:00 +0000 Received: from localhost ([127.0.0.1]:47680 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpokm-0005yE-I9 for submit@debbugs.gnu.org; Mon, 29 Jun 2020 04:03:00 -0400 Received: from lists.gnu.org ([209.51.188.17]:34002) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpokg-0005y1-Qr for submit@debbugs.gnu.org; Mon, 29 Jun 2020 04:02:58 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:45442) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1jpoke-0004NK-NE for guix-patches@gnu.org; Mon, 29 Jun 2020 04:02:52 -0400 Received: from mail-lf1-x133.google.com ([2a00:1450:4864:20::133]:35089) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1jpokd-0008IF-1O for guix-patches@gnu.org; Mon, 29 Jun 2020 04:02:52 -0400 Received: by mail-lf1-x133.google.com with SMTP id t74so8561928lff.2 for ; Mon, 29 Jun 2020 01:02:50 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=mime-version:from:date:message-id:subject:to; bh=3PmuA3BsqEiNod4H2w2kDFBuxwdfHtNjebhlLpcvCzQ=; b=Q76Y9lP6ZUSNw+N/tAF/Sr6jAxTDrYRqZ9LDY2/Bj/Jw1i1lc8pyzYEC16jb+S4IMS zQe/aVFMyEXLKJeAlhtjuDjxsle8ywxjjHsOCJl79nG1Z++sCnO59b+LtyiS0nc3IBhd 2QmKWN756z4Ms48Ae/S9H4C5svBJC248W+gWpwEqNTRTiReomLgIoVdWUuayaEt7xzst 454cBW8xVqt7AfFPC+xiifYSH/7ocKTu2Ifk0Cb+m6LQsAotMph0Iz9d43ecF18Zz+91 yQgxA0JmM5TTAxBU6zffv77TLji2vURdZ49TjNkGfIzfMj/PwA4GQq8i7ADNecgYmWXm rjKg== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:mime-version:from:date:message-id:subject:to; bh=3PmuA3BsqEiNod4H2w2kDFBuxwdfHtNjebhlLpcvCzQ=; b=VoP94qSSnPfdR/C6Il11sX+aUcR9w7TnuG6MaKL76Ddj8ub+JwsTpLU+hxk+LHMC6w spfdpRa985GCdQctsNsmOudOtUVSARHpP7Rrba4YRzxPhaULxA6U30EE1dji96G+xZx6 bjNOcZOcMNuHmv9cRUYK7gqtfWOAknXTMpQwKQTyO5oOruCentCDLBrnwT6cbjm8Nep3 C4qO7YIyBP5vCHbtzCphI2lcciFLk+jRFfh1nJ2Teu784OMVXTPLlajy+bUcXcG8Y8UP Fv7GlWI34Eq9IPmbXyr0glQK1NwoEu0scwRlrdkJdeiZ7rb+wNdrUtInhtO9YEYglvzN 615Q== X-Gm-Message-State: AOAM530TQpyhpb20zjZ5CdSebyz5KVotEUu50rac1JpA7VlqrF1CJJSU Ub36HeZrOfhWomleYE+TxKeNmjnBK2BK75vFoiQoJkf+ X-Google-Smtp-Source: ABdhPJzPqDY0FQ23yZjDWWWWtHm+idLZB87o0hJQq9XCFixmTrZDC3hw+1HSWtN1gFx+Lu5hyEUNYl0cztrtCs44n6U= X-Received: by 2002:ac2:4c03:: with SMTP id t3mr8431343lfq.72.1593417768610; Mon, 29 Jun 2020 01:02:48 -0700 (PDT) MIME-Version: 1.0 From: Lo Peter Date: Mon, 29 Jun 2020 16:02:36 +0800 Message-ID: Subject: [PATCH] gnu: Add r-fhtest and its dependencies To: guix-patches@gnu.org Content-Type: text/plain; charset="UTF-8" Received-SPF: pass client-ip=2a00:1450:4864:20::133; envelope-from=peterloleungyau@gmail.com; helo=mail-lf1-x133.google.com X-detected-operating-system: by eggs.gnu.org: No matching host in p0f cache. That's all we know. X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=_AUTOLEARN X-Spam_action: no action X-Spam-Score: 0.7 (/) X-Debbugs-Envelope-To: submit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.3 (--) Dear all, I am submitting a patch series for r-fhtest and its dependencies. Note that one of its dependency r-kmsurv is not included here, because I previously submitted its patch in patch 2 of bug#42107. Regards, Peter ------------=_1599852961-29007-1--