From unknown Sat Jun 21 03:25:47 2025 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable MIME-Version: 1.0 X-Mailer: MIME-tools 5.509 (Entity 5.509) Content-Type: text/plain; charset=utf-8 From: bug#42107 <42107@debbugs.gnu.org> To: bug#42107 <42107@debbugs.gnu.org> Subject: Status: [PATCH] gnu: Add r-survminer and its dependencies Reply-To: bug#42107 <42107@debbugs.gnu.org> Date: Sat, 21 Jun 2025 10:25:47 +0000 retitle 42107 [PATCH] gnu: Add r-survminer and its dependencies reassign 42107 guix-patches submitter 42107 Lo Peter severity 42107 normal tag 42107 patch thanks From debbugs-submit-bounces@debbugs.gnu.org Sun Jun 28 05:28:21 2020 Received: (at submit) by debbugs.gnu.org; 28 Jun 2020 09:28:21 +0000 Received: from localhost ([127.0.0.1]:45209 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpTbp-000134-Eu for submit@debbugs.gnu.org; Sun, 28 Jun 2020 05:28:21 -0400 Received: from lists.gnu.org ([209.51.188.17]:49904) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpTbl-00012v-NU for submit@debbugs.gnu.org; Sun, 28 Jun 2020 05:28:20 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:32952) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1jpTbl-0001lc-HH for guix-patches@gnu.org; Sun, 28 Jun 2020 05:28:17 -0400 Received: from mail-lj1-x22a.google.com ([2a00:1450:4864:20::22a]:41285) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1jpTbk-0004YI-4s for guix-patches@gnu.org; Sun, 28 Jun 2020 05:28:17 -0400 Received: by mail-lj1-x22a.google.com with SMTP id 9so14637456ljc.8 for ; Sun, 28 Jun 2020 02:28:15 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=mime-version:from:date:message-id:subject:to; bh=iuZMRLUs5/M6TskPMqGptm9f3EGn3XHzZU/7F64jOeM=; b=f5sB9jkJ8I5XarBsHuLW/DT4GL/qy5ZrqpN8porZTt/DPnB5TuIn5mNktCHOs9pd7F TZ+uRzjab6avZmm4qjfhpXQudyZDfj2NSxzHQnFoXnGtdfxj+FVs9MdwerrxAKVnASL6 zDdga6vInNcCRmCQyZIUI1piELReuN59/k83L2n5yyVoGDIAgSMcev5ZRzg6WPRj//K3 GAoJ0dDZc1fYZUeNWZLjHrK7Krv7wmtNzmLOZhTHdNYIwDX5xkVp9zImQpd06yFNB3E9 brqbxk0s4/hY3mfgOonYjer1gPpQBsgSmpc4wdF+gmhcU5qArDfYM458jcVTFlsy2E2I CGYw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:mime-version:from:date:message-id:subject:to; bh=iuZMRLUs5/M6TskPMqGptm9f3EGn3XHzZU/7F64jOeM=; b=VCUII/PQ7swAB2s3dOh2xdQvIQAzx/564ONJAjfAVRA7tgTvFGH0LzPESxIxw/PAyz dRJtjvnnbsqJ3oJnD7AIbVB5MjhUKKsQnURrnvr8tuKltfYQr7HpGT4XHzUUaKrLJXQ6 AAZA0yG855RobWrsFBFpYzd01BpMMuhvNnIuTp3mErkuyqR1fP0YMT8B3oNmWP2SkqTs 6wYJbYaiZBkb1N31haZ4wu7a1DPsmt64fgRLQn9Y5vtVcyUw9LtVfq0/i9ugfWmBUkQ6 Dz3M47vU80UX81wjw4xbWC69EhQFgUy32mhr2x3dRA2E/JY7+V0z7Fq6yQSFrLhUnh7Q 0UCA== X-Gm-Message-State: AOAM533zffsWyl2c5vJBMc5xMn/33u0r9fJ4uH9CUB3SxDEIFy4bjKk3 uDyewFfdy8Gb9c4gsCSBlrpy4WILloZn2kMH2X+ZvXJI X-Google-Smtp-Source: ABdhPJwXpSwO/dfy85/PBOlrHNTHdUl07kkGUbA8e7Wi8LqPsqPb8BMgMK5F48qfNXQV5IICdNO7p/JABTseWmql1Do= X-Received: by 2002:a2e:b8d5:: with SMTP id s21mr5248078ljp.34.1593336493670; Sun, 28 Jun 2020 02:28:13 -0700 (PDT) MIME-Version: 1.0 From: Lo Peter Date: Sun, 28 Jun 2020 17:28:02 +0800 Message-ID: Subject: [PATCH] gnu: Add r-survminer and its dependencies To: guix-patches@gnu.org Content-Type: text/plain; charset="UTF-8" Received-SPF: pass client-ip=2a00:1450:4864:20::22a; envelope-from=peterloleungyau@gmail.com; helo=mail-lj1-x22a.google.com X-detected-operating-system: by eggs.gnu.org: No matching host in p0f cache. That's all we know. X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=_AUTOLEARN X-Spam_action: no action X-Spam-Score: 0.7 (/) X-Debbugs-Envelope-To: submit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.3 (--) Dear all, I am submitting a patch series of r-survminer and its dependencies. Regards, Peter From debbugs-submit-bounces@debbugs.gnu.org Sun Jun 28 05:30:02 2020 Received: (at 42107) by debbugs.gnu.org; 28 Jun 2020 09:30:02 +0000 Received: from localhost ([127.0.0.1]:45215 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpTdR-00016L-Np for submit@debbugs.gnu.org; Sun, 28 Jun 2020 05:30:02 -0400 Received: from mail-pj1-f49.google.com ([209.85.216.49]:55338) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpTdO-00015Z-RY for 42107@debbugs.gnu.org; Sun, 28 Jun 2020 05:30:00 -0400 Received: by mail-pj1-f49.google.com with SMTP id f6so2734469pjq.5 for <42107@debbugs.gnu.org>; Sun, 28 Jun 2020 02:29:58 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id; bh=sCKkiVQgGrrnL3DR/jP2EJfU0M3VbCE9OyRge2WxLd4=; b=dvriRfwTJzPA3KdUfyKW6SqBjWOcqcXFW8fJsH08eT0Wx7Bu3Ih2EFi7P/+tNBbq8D F+x662VQlQ/+lQC6dR/f8i8qTUgSJCMUTpdrwVpaNzUNPnzJiwDSEXwc4Nz9OAm2KwL/ yUVWsMdUmkG47eLWaes4K9frTOSuN2P8u+ma/UzzevihUaih9dhCNYwGqWuR88VA50Q3 3IuMbaFdI7BrkEDCF4v26bB1m8zJT0HGphP/QOFTb9qmdSMmgqy4zsmPv2CRk9P5M5x2 FmamZfK0cd0Trirnum1N4zuIuIt9bWVk2u0h4X+tb7CQi1NqgLcFq0RdzKYNUDyYY5cP VhBA== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id; bh=sCKkiVQgGrrnL3DR/jP2EJfU0M3VbCE9OyRge2WxLd4=; b=CXiocn5AViZe5MQGqKiSUm9MD+Vn5c4+soo/JMqGyPhnfpeHLao39aHrgiv+litlAC DqPyRPpb5/UYS9DJ10+NeK48ZnbuH1rGKl960GFd96mg9Rs7CHG8If7V6h0qX/KvDQGa AEL/GrMLbSTi0AiW6kbpgNtVLsoFXG4iM/yseISOYb3MHj95TUNWsLsx9fC+IVnVSNgX vFIbgXqp0boQpG5XEgjIk2WfeCKMpxF8Jo1pTdeJqPdCsAWfD4zcfbhOnJlrdqDmT5Nk zPQXTODJLeRsr9xmX0YZwkKUeMD09klSq3E3TmgARmRCY9aCysJcLlq6dPvKSPc3UO68 4KRw== X-Gm-Message-State: AOAM532mfEg8Fq+uS5+rmlqWj0mrHf75OA74/0/poM2BujD7nvtUK6ah JpAmrahEPN0AitzeSTeeU5sJY1B30go= X-Google-Smtp-Source: ABdhPJx3yzrIaVqEnUEi+3jCiGxzDcYQcIpW2fqojYMgFLL1V9tfZcH4BJyavK+Kh4q/w103wnFd1g== X-Received: by 2002:a17:90a:a47:: with SMTP id o65mr12731470pjo.70.1593336592487; Sun, 28 Jun 2020 02:29:52 -0700 (PDT) Received: from localhost.localdomain (059149170072.ctinets.com. [59.149.170.72]) by smtp.gmail.com with ESMTPSA id g9sm30259812pfm.151.2020.06.28.02.29.51 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sun, 28 Jun 2020 02:29:51 -0700 (PDT) From: Peter Lo To: 42107@debbugs.gnu.org Subject: [PATCH 1/6] gnu: Add r-km-ci. Date: Sun, 28 Jun 2020 17:29:39 +0800 Message-Id: <20200628092944.19939-1-peterloleungyau@gmail.com> X-Mailer: git-send-email 2.17.1 X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 42107 Cc: Peter Lo X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/cran.scm (r-km-ci): New variable. --- gnu/packages/cran.scm | 25 +++++++++++++++++++++++++ 1 file changed, 25 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index ab5e57c0e2..b054c62550 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22325,3 +22325,28 @@ across a wide array of bioinformatic R packages.") and clustering large sequence datasets using fast alignment-free k-mer counting and recursive k-means partitioning.") (license license:gpl3))) + +(define-public r-km-ci + (package + (name "r-km-ci") + (version "0.5-2") + (source + (origin + (method url-fetch) + (uri (cran-uri "km.ci" version)) + (sha256 + (base32 + "1l6kw8jppaa1802yc5pbfwwgac56nhwc9p076ivylhms4w7cdf8v")))) + (properties `((upstream-name . "km.ci"))) + (build-system r-build-system) + (propagated-inputs `(("r-survival" ,r-survival))) + (home-page + "https://cran.r-project.org/web/packages/km.ci/") + (synopsis + "Confidence intervals for the Kaplan-Meier estimator") + (description + "Computes various confidence intervals for the Kaplan-Meier +estimator, namely: Petos CI, Rothman CI, CI's based on Greenwoods +variance, Thomas and Grunkemeier CI and the simultaneous confidence +bands by Nair and Hall and Wellner.") + (license license:gpl2+))) -- 2.17.1 From debbugs-submit-bounces@debbugs.gnu.org Sun Jun 28 05:30:06 2020 Received: (at 42107) by debbugs.gnu.org; 28 Jun 2020 09:30:06 +0000 Received: from localhost ([127.0.0.1]:45220 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpTdW-000179-BQ for submit@debbugs.gnu.org; Sun, 28 Jun 2020 05:30:06 -0400 Received: from mail-pl1-f178.google.com ([209.85.214.178]:42941) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpTdQ-00015b-JG for 42107@debbugs.gnu.org; Sun, 28 Jun 2020 05:30:00 -0400 Received: by mail-pl1-f178.google.com with SMTP id k6so5937445pll.9 for <42107@debbugs.gnu.org>; Sun, 28 Jun 2020 02:30:00 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references; bh=7tjxVQRfjh4M0hGEtxtGcXYU/WBAUOodAakk+B6TuxE=; b=TAXKuv4rnp4rytTDvBQkOAS9EwvnXBEbcFYFHrn0gcTQkXZvNBIOKwEb/ok39l/44y 77YNJL/tua1hTZqwEc2Kxa0bFow/OZq5Tvf7Vq0yfLMUrTilvnk7iDGYsqhUlO+XRDo3 MqQYELrnA9ndyH5MQLNN/pI8+Jp1+YfhgP0HeLUz9AKXFw15c74/JbfXa3sOyrk5gLdg ymMOqCLPD9TdSl865j1yCEKqA1Yw9l6HCIpShiONeOx66xrRAonyG9K1ceZq3F0pU3n5 UJmJTcoOECy0E4wLzxbABryAN+hMzsDjxXcTdDqHIQBz9EHjNsJZWDfscpmoyDd+mwj1 XpIg== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references; bh=7tjxVQRfjh4M0hGEtxtGcXYU/WBAUOodAakk+B6TuxE=; b=rq2wGHDgXmQ480z7nTB2E+KmT+8SiwwKDICH5e+gatf8PrSf06QEkXPi4GnLcp0NBD 1B2fqlJ1J6alz7kjgi5Hqx3Xwf34YSI9oEuGy8HitSxTqm9TmbGydsIaBxL3ciyG5Fa2 ZqWeCzUeRS/hAZyKNsbS693yUKj5jEwMI1QfOvMc1RzoK3OHA923jr4/DFfBZ3yFFa7c L3YgeMmD+iTSgi9EU4P5zwfxKZJelWry//AJznEF4fUgaMUAXZuASMdtWhVJlr5zeyL+ JWxoarqW414ATcMTwhSsR8ebMAdrxlcNNmdiR553iQIMtMEyqGSR/jsbYSTdWZOMJ74c jNeA== X-Gm-Message-State: AOAM532/yLRqkaNApfcJQOMprnKWYDZXlE+00ijJGVsadmPOSYVHt/6E J5j+EzyJftPCuCUXtg6LUnPy+GdgQAA= X-Google-Smtp-Source: ABdhPJwzd20urLnPyzxEktRNoi/B8QH+N3s/plqrFTFz6Z1Nv34PLgUMgRO07YU6SJE0EkUfyN3K1Q== X-Received: by 2002:a17:90a:aa8e:: with SMTP id l14mr12516023pjq.229.1593336594250; Sun, 28 Jun 2020 02:29:54 -0700 (PDT) Received: from localhost.localdomain (059149170072.ctinets.com. [59.149.170.72]) by smtp.gmail.com with ESMTPSA id g9sm30259812pfm.151.2020.06.28.02.29.52 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sun, 28 Jun 2020 02:29:53 -0700 (PDT) From: Peter Lo To: 42107@debbugs.gnu.org Subject: [PATCH 2/6] gnu: Add r-kmsurv. Date: Sun, 28 Jun 2020 17:29:40 +0800 Message-Id: <20200628092944.19939-2-peterloleungyau@gmail.com> X-Mailer: git-send-email 2.17.1 In-Reply-To: <20200628092944.19939-1-peterloleungyau@gmail.com> References: <20200628092944.19939-1-peterloleungyau@gmail.com> X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 42107 Cc: Peter Lo X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/cran.scm (r-kmsurv): New variable. --- gnu/packages/cran.scm | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index b054c62550..ceda3c57a3 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22350,3 +22350,26 @@ estimator, namely: Petos CI, Rothman CI, CI's based on Greenwoods variance, Thomas and Grunkemeier CI and the simultaneous confidence bands by Nair and Hall and Wellner.") (license license:gpl2+))) + +(define-public r-kmsurv + (package + (name "r-kmsurv") + (version "0.1-5") + (source + (origin + (method url-fetch) + (uri (cran-uri "KMsurv" version)) + (sha256 + (base32 + "0hi5vvk584rl70gbrr75w9hc775xmbxnaig0dd6hlpi4071pnqjm")))) + (properties `((upstream-name . "KMsurv"))) + (build-system r-build-system) + (home-page + "https://cran.r-project.org/web/packages/KMsurv/") + (synopsis + "Data sets from Klein and Moeschberger (1997), Survival Analysis") + (description + "Data sets and functions for Klein and Moeschberger (1997), +\"Survival Analysis, Techniques for Censored and Truncated Data\", +Springer.") + (license license:gpl3+))) -- 2.17.1 From debbugs-submit-bounces@debbugs.gnu.org Sun Jun 28 05:30:07 2020 Received: (at 42107) by debbugs.gnu.org; 28 Jun 2020 09:30:07 +0000 Received: from localhost ([127.0.0.1]:45222 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpTdW-00017B-MX for submit@debbugs.gnu.org; Sun, 28 Jun 2020 05:30:06 -0400 Received: from mail-pj1-f49.google.com ([209.85.216.49]:39461) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpTdS-00015e-0Y for 42107@debbugs.gnu.org; Sun, 28 Jun 2020 05:30:02 -0400 Received: by mail-pj1-f49.google.com with SMTP id b92so6753392pjc.4 for <42107@debbugs.gnu.org>; Sun, 28 Jun 2020 02:30:01 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references; bh=r8As127uRve3WZRs5tfPqVv/jRqtMDMhkZIWtlCLjOk=; b=h7ijmYdS64HlDb3k9iHfK7A5qMN5rC1FRatjq87wlzRNqhVfQVK/OEq8o8gB89XFm3 wEOUYALKufy4pM4LKJjwTZuhEa4P5Ui64+ElJsNMCHAgDHzNv2jKsJA8Q4xvghKx6HL3 KLZTbtDNjWrpC1uGhvwFs8lbKWqaKnBgf/IRH7zHqQnfTOw2tqo+nRmuqQ3YntTFXXXs TPF7cUO7RifBl9Z1QuP3ngfTcLLPo3hhh6QcrmWVueiC5u5NPnitga7qI/VvpEM+YO1n fHbDFlBfm5FtL9k1K4R9JbFkn04j13AtEEpHRpm0rPPDlZD6JOFLmVQyaU/3B2ISYsNM 1uNQ== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references; bh=r8As127uRve3WZRs5tfPqVv/jRqtMDMhkZIWtlCLjOk=; b=rSJRyZ0MnjSyxqfEsOva8NVA5a3dgLpRknb7aZCzyHkn5od6N+cPN7+oBCHvOdAdnF zQ3HAzVj24WNKLndSB9jVSJ9i5aL8RPKzoGvthfky1/ECTtAlV/O27+7XjtNMzApG1xB BoavFn9utKXIv98L9TW9AoIjtunkp8LQVOzStAn/eUDbzTgeDsz10p3nCH0xcmZopSvw 49l/N5Pb8gURL3Hhe9Y560ZPRUqt2csTHl+7EZ29FIdXL4CBADlxYophhl4m698nYLNA GaBbrVFSByR/818DeJ6FvZ0U3e/7hawGCuaji5bb99Kedn9kbzn817edbozkw5Dd8E+n Gh8A== X-Gm-Message-State: AOAM532DmNRulMXKT83gezv9PZEFovst5kWx3oYDZ8zQQDqkYwiXdI3K 9RBPgurn1B6k6eDVVT7bmN6sC0c4YA4= X-Google-Smtp-Source: ABdhPJwuqS9aG+3WhspasXjf1aVrrwbNqLpXGDMQQJqZJxNYarkOGpJVy/KfjwpdL28Ybk8C1ahmuA== X-Received: by 2002:a17:902:7896:: with SMTP id q22mr9543712pll.237.1593336595919; Sun, 28 Jun 2020 02:29:55 -0700 (PDT) Received: from localhost.localdomain (059149170072.ctinets.com. [59.149.170.72]) by smtp.gmail.com with ESMTPSA id g9sm30259812pfm.151.2020.06.28.02.29.54 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sun, 28 Jun 2020 02:29:55 -0700 (PDT) From: Peter Lo To: 42107@debbugs.gnu.org Subject: [PATCH 3/6] gnu: Add r-survmisc. Date: Sun, 28 Jun 2020 17:29:41 +0800 Message-Id: <20200628092944.19939-3-peterloleungyau@gmail.com> X-Mailer: git-send-email 2.17.1 In-Reply-To: <20200628092944.19939-1-peterloleungyau@gmail.com> References: <20200628092944.19939-1-peterloleungyau@gmail.com> X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 42107 Cc: Peter Lo X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/cran.scm (r-survmisc): New variable. --- gnu/packages/cran.scm | 34 ++++++++++++++++++++++++++++++++++ 1 file changed, 34 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index ceda3c57a3..6ea06f259f 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22373,3 +22373,37 @@ bands by Nair and Hall and Wellner.") \"Survival Analysis, Techniques for Censored and Truncated Data\", Springer.") (license license:gpl3+))) + +(define-public r-survmisc + (package + (name "r-survmisc") + (version "0.5.5") + (source + (origin + (method url-fetch) + (uri (cran-uri "survMisc" version)) + (sha256 + (base32 + "00nvvl8gz4477ab24rd0xvfksm8msv8h021b9ld5c9cizc41n2bm")))) + (properties `((upstream-name . "survMisc"))) + (build-system r-build-system) + (propagated-inputs + `(("r-data-table" ,r-data-table) + ("r-ggplot2" ,r-ggplot2) + ("r-gridextra" ,r-gridextra) + ("r-km-ci" ,r-km-ci) + ("r-kmsurv" ,r-kmsurv) + ("r-knitr" ,r-knitr) + ("r-survival" ,r-survival) + ("r-xtable" ,r-xtable) + ("r-zoo" ,r-zoo))) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page + "https://cran.r-project.org/web/packages/survMisc/") + (synopsis + "Miscellaneous Functions for Survival Data") + (description + "This package provides a collection of functions to help in the +analysis of right-censored survival data. These extend the methods +available in package:survival.") + (license license:gpl2))) -- 2.17.1 From debbugs-submit-bounces@debbugs.gnu.org Sun Jun 28 05:30:07 2020 Received: (at 42107) by debbugs.gnu.org; 28 Jun 2020 09:30:07 +0000 Received: from localhost ([127.0.0.1]:45224 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpTdX-00017J-0g for submit@debbugs.gnu.org; Sun, 28 Jun 2020 05:30:07 -0400 Received: from mail-pf1-f174.google.com ([209.85.210.174]:41574) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpTdT-00015g-UL for 42107@debbugs.gnu.org; Sun, 28 Jun 2020 05:30:04 -0400 Received: by mail-pf1-f174.google.com with SMTP id q17so6611058pfu.8 for <42107@debbugs.gnu.org>; Sun, 28 Jun 2020 02:30:03 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references; bh=sXU9E3RdOKTKRwmMQsjwvurtgI6jLhX5F3fCWbd5l2E=; b=EW64iXckyjKBgU88pdQUhidC+ytQDu3dSfmLY19Osy/0lmZcOdWm76IGfDXbqiimOf elBBMj7Uf6oaO+pqG7i8uzDipfwHnp+VFkiofMzjdqZIKBW22VV574vp08Jm+0ceZqm+ qO7DtEBcFBywn1A3VDNby7EofAsAbBTf6OjXMufNZc+yDO+TLouns7XLKqvta0cHBPpJ GmKGk6wqb45O+RpedAlLB9HY8SHFihyZ7Y4AGTWdD6mF9zQEyE5SvE3lF5TLsM5SOxE1 QmCbZw/H8b3igA38oWwqGwl+IMAwL2LpkokNndm4qBsf/ktUn/oIf1CLh/K4cNDB+yJq cw4g== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references; bh=sXU9E3RdOKTKRwmMQsjwvurtgI6jLhX5F3fCWbd5l2E=; b=qQEyuyflYJ2KUUxYH6mh918kseEoB6qKLgTSPFMlI58MxkTtQ6sXIp5FuvxxUyaf8r kqeK9wZj0h/OnUNoD4yqHRyvtEbQL1sOdFheeFfYnaqWgbIndzJBlLcrcGOwBAfxHLum ohFO+ZJUYkpSOF0j/UP8SX0xV6Iwz3RqLOFXfb+Chxhha2R/oB9nZppv2u1/nlpS25hY 92oR1m1oLicwDX29jFtLOzwOgoBtTXtpSKu0npNeHOJwKUbQJmVB8qmj0VXFle/bIdp/ JewXjzAtZHtUGoKR8UDRcnOhiQ/vBbFRASqu6+D3RKLRuqZ7cli/kzlJRD93iaDB+38E ttnQ== X-Gm-Message-State: AOAM531lt2WYZP/oRXUYs6b2yLHtvAJf2kc4yPXU7zGFhLxYImsCWooc rEiCXzqYCH8HAKiGVd71u+Rw637vz9k= X-Google-Smtp-Source: ABdhPJwqEvsoa3QBF6Xz4moe9RxvKqZtxC8rHj1f5KIbBwM+ZdeREql9MD6hmm3QKQa2F+qZtZQ02w== X-Received: by 2002:a62:5c02:: with SMTP id q2mr10237799pfb.232.1593336597544; Sun, 28 Jun 2020 02:29:57 -0700 (PDT) Received: from localhost.localdomain (059149170072.ctinets.com. [59.149.170.72]) by smtp.gmail.com with ESMTPSA id g9sm30259812pfm.151.2020.06.28.02.29.56 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sun, 28 Jun 2020 02:29:56 -0700 (PDT) From: Peter Lo To: 42107@debbugs.gnu.org Subject: [PATCH 4/6] gnu: Add r-exactranktests. Date: Sun, 28 Jun 2020 17:29:42 +0800 Message-Id: <20200628092944.19939-4-peterloleungyau@gmail.com> X-Mailer: git-send-email 2.17.1 In-Reply-To: <20200628092944.19939-1-peterloleungyau@gmail.com> References: <20200628092944.19939-1-peterloleungyau@gmail.com> X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 42107 Cc: Peter Lo X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/cran.scm (r-exactranktests): New variable. --- gnu/packages/cran.scm | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 6ea06f259f..3077b1e132 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22407,3 +22407,26 @@ Springer.") analysis of right-censored survival data. These extend the methods available in package:survival.") (license license:gpl2))) + +(define-public r-exactranktests + (package + (name "r-exactranktests") + (version "0.8-31") + (source + (origin + (method url-fetch) + (uri (cran-uri "exactRankTests" version)) + (sha256 + (base32 + "1154dkcid3njhamdp87qs9bnx7l8bdqkcjsds9q9f2xmizs9x8gw")))) + (properties + `((upstream-name . "exactRankTests"))) + (build-system r-build-system) + (home-page + "https://cran.r-project.org/web/packages/exactRankTests/") + (synopsis + "Exact Distributions for Rank and Permutation Tests") + (description + "Computes exact conditional p-values and quantiles using an +implementation of the Shift-Algorithm by Streitberg & Roehmel.") + (license license:gpl2+))) -- 2.17.1 From debbugs-submit-bounces@debbugs.gnu.org Sun Jun 28 05:30:12 2020 Received: (at 42107) by debbugs.gnu.org; 28 Jun 2020 09:30:12 +0000 Received: from localhost ([127.0.0.1]:45227 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpTdb-00018a-Du for submit@debbugs.gnu.org; Sun, 28 Jun 2020 05:30:12 -0400 Received: from mail-pg1-f170.google.com ([209.85.215.170]:38204) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpTdV-00015n-Fq for 42107@debbugs.gnu.org; Sun, 28 Jun 2020 05:30:05 -0400 Received: by mail-pg1-f170.google.com with SMTP id e8so6975020pgc.5 for <42107@debbugs.gnu.org>; Sun, 28 Jun 2020 02:30:05 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references; bh=AsAEZCW18hCu3X/wbik1XTIc5bsQKc3ipyaMIfSwue0=; b=NoT6iUJ1o/MQegVEyOw2ZY/PjWyEwlzDNFx/nbyPibK3VJqRn7MXznQNB6vliEmzBF ZSA/2mLlNFkW1irsG0//P9q7chxurPtWyzwvp3ghsbjpNlrp9PRCSnaBebjmbJ4bEmEp XHMirkPG2QJeIUtMZwXw94fdkZ4ZtEcWvQUIHUyd+54Q54GUWBk8LqkwhgfkJM1j/wHD 6ZvKzg/pTTc/AIeNUMBii9GWfyyo1jXenz9UdK9kGbvzXdHPYYVf8AhX7tK5+e0IbJyD g7KtpoA8G/5SKjqWNKOt3CfI7ej1WJJmF0TIiMiHLNVhnRWtoHUfd9agdJcttYIKnJLp mJFQ== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references; bh=AsAEZCW18hCu3X/wbik1XTIc5bsQKc3ipyaMIfSwue0=; b=sPUwQlvxZQdR8vZHygW+BVDFa+wsW1olNWM9xUbz9P9v5QgN58qNwQmGg0inEJ/axZ 13kar49HpVDK9+lva2b91MNKLngKP9UvJWzRz6cXKka/XYpwJ3V7XtYSkvzgRUnLQ4Cq An+ZQUQMlsYn9SVER50hZ/IOFO8rxQIohYPmLyCPcZo38UbH2AStii0W7ggl1qpbohq5 HbSstxuNRYuCYMTH7C/Oxp2nmVVx7/i5a1we81bENcG2Jc0i9cDiUJ1A7FasBLeqNup4 HnNiF8FEZoDznzzWpoNSiDbH5NhFZ6DZqAPqbOg7kIs1pteDJqVB4CUyq2McxjW9pCZr IUMA== X-Gm-Message-State: AOAM530uQZLWKylehHKNBvORXmfo/v5yBBDdrvzaKWjyJCjqMSekw0mV 8hcQmM1+urMw/7xKPXL0QKYdLbUqbyc= X-Google-Smtp-Source: ABdhPJxlthtiTZODq7pHvcqD+0AfXm3dzC1zoau+UjJkw870XjLsQqCfPXAES3t4I6yUoKOEzw4wnw== X-Received: by 2002:aa7:84d9:: with SMTP id x25mr10214761pfn.300.1593336599203; Sun, 28 Jun 2020 02:29:59 -0700 (PDT) Received: from localhost.localdomain (059149170072.ctinets.com. [59.149.170.72]) by smtp.gmail.com with ESMTPSA id g9sm30259812pfm.151.2020.06.28.02.29.57 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sun, 28 Jun 2020 02:29:58 -0700 (PDT) From: Peter Lo To: 42107@debbugs.gnu.org Subject: [PATCH 5/6] gnu: Add r-maxstat. Date: Sun, 28 Jun 2020 17:29:43 +0800 Message-Id: <20200628092944.19939-5-peterloleungyau@gmail.com> X-Mailer: git-send-email 2.17.1 In-Reply-To: <20200628092944.19939-1-peterloleungyau@gmail.com> References: <20200628092944.19939-1-peterloleungyau@gmail.com> X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 42107 Cc: Peter Lo X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/cran.scm (r-maxstat): New variable. --- gnu/packages/cran.scm | 24 ++++++++++++++++++++++++ 1 file changed, 24 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 3077b1e132..f51e69689b 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22430,3 +22430,27 @@ available in package:survival.") "Computes exact conditional p-values and quantiles using an implementation of the Shift-Algorithm by Streitberg & Roehmel.") (license license:gpl2+))) + +(define-public r-maxstat + (package + (name "r-maxstat") + (version "0.7-25") + (source + (origin + (method url-fetch) + (uri (cran-uri "maxstat" version)) + (sha256 + (base32 + "114z1rwxwvk05ijjhdppzm148n1h192fp0w12ky10zkrhf6kphbg")))) + (properties `((upstream-name . "maxstat"))) + (build-system r-build-system) + (propagated-inputs + `(("r-exactranktests" ,r-exactranktests) + ("r-mvtnorm" ,r-mvtnorm))) + (home-page + "https://cran.r-project.org/web/packages/maxstat/") + (synopsis "Maximally Selected Rank Statistics") + (description + "Maximally selected rank statistics with several p-value +approximations.") + (license license:gpl2+))) -- 2.17.1 From debbugs-submit-bounces@debbugs.gnu.org Sun Jun 28 05:30:12 2020 Received: (at 42107) by debbugs.gnu.org; 28 Jun 2020 09:30:12 +0000 Received: from localhost ([127.0.0.1]:45229 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpTdc-00018c-Cg for submit@debbugs.gnu.org; Sun, 28 Jun 2020 05:30:12 -0400 Received: from mail-pl1-f169.google.com ([209.85.214.169]:44378) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jpTdX-00016N-25 for 42107@debbugs.gnu.org; Sun, 28 Jun 2020 05:30:08 -0400 Received: by mail-pl1-f169.google.com with SMTP id bj10so717366plb.11 for <42107@debbugs.gnu.org>; Sun, 28 Jun 2020 02:30:06 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references; bh=DujNAhEgaxbryM8i9a6oVGZw8fUpYlKmCUXLQC/HGNI=; b=t90K/+FIYa6Y5bQqL9QAAjPRDuM9L4ZAj6Xw+t6kycVKHIPQBFEHXiPR593SFBTTyB BJDhLgY3BzXotQVu5240cRViedajKz9wZ+rE2TfolAFNMabxPxtu7AkG6sO9LpOWU3w4 WhKF8GCgxKOV+bIV/AXsmpXfyaS/oJngkDiKGv3K6Y4ogl0FS2lAXY8Q4uOsvACD3j/1 UsdLVCdXhTnBtqz8ykYQEXsZoAMzIvBu5wSYRvlcEUXa/14qqK77/2Lp6PcovnJ4nVe+ 0zwQ3MbhTazgJ28qlXuXy39w05SOLxRB4E0G9pReRPElFoWn4ZcDnZ9ACP2fhENZ5AtH KlUQ== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references; bh=DujNAhEgaxbryM8i9a6oVGZw8fUpYlKmCUXLQC/HGNI=; b=I5R2UzzXedlTn4kd84dK/IBbNSt5+j4Ju5NVudHi0PXOSZghXgD4xJlA8f+BW810wL i2UQ1J+2zcsF3ZpxpyUoFXcROLewfFFWqROHiPpu1vSK+ackCbyMznGm1LlB7qXc2gr7 NnIFqxeSQIG+AnXvhuyQBgnCwXXe29ptdCla8uYbsR8ZBnY8ZDGTGjTyWlA1MPyX/c1f ZQvpTW2xy7sqpv+Js7oDqLm/h+/jeMhVhPJDQyWdIST2bS/n/qke3BNt/16j8bmXTaXk uZ+fd/UA5pZMSZywnzCgNbL+N2rwZXNHS60otXz2/mO6TJ7N/8pws104fjQ27sEQ/pMU gzgw== X-Gm-Message-State: AOAM532dTvCTaDbSWxvPkP+aUovNYBuU7bUEMIEK6nrPG3k/ZYqjtpJ0 HKPATZbi36u6E8w8CGRrVsF8yEcK0NQ= X-Google-Smtp-Source: ABdhPJysd2pUVTC3aCFe+mv+zcGHPnMB6+SgmQRgAczTGZVtbyA2EGe7yY3I1X9hQ/Ns/sSF39d1EA== X-Received: by 2002:a17:90a:e2c7:: with SMTP id fr7mr8366418pjb.103.1593336600863; Sun, 28 Jun 2020 02:30:00 -0700 (PDT) Received: from localhost.localdomain (059149170072.ctinets.com. [59.149.170.72]) by smtp.gmail.com with ESMTPSA id g9sm30259812pfm.151.2020.06.28.02.29.59 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sun, 28 Jun 2020 02:30:00 -0700 (PDT) From: Peter Lo To: 42107@debbugs.gnu.org Subject: [PATCH 6/6] gnu: Add r-survminer. Date: Sun, 28 Jun 2020 17:29:44 +0800 Message-Id: <20200628092944.19939-6-peterloleungyau@gmail.com> X-Mailer: git-send-email 2.17.1 In-Reply-To: <20200628092944.19939-1-peterloleungyau@gmail.com> References: <20200628092944.19939-1-peterloleungyau@gmail.com> X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 42107 Cc: Peter Lo X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/cran.scm (r-survminer): New variable. --- gnu/packages/cran.scm | 41 +++++++++++++++++++++++++++++++++++++++++ 1 file changed, 41 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index f51e69689b..4b28f25954 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22454,3 +22454,44 @@ implementation of the Shift-Algorithm by Streitberg & Roehmel.") "Maximally selected rank statistics with several p-value approximations.") (license license:gpl2+))) + +(define-public r-survminer + (package + (name "r-survminer") + (version "0.4.7") + (source + (origin + (method url-fetch) + (uri (cran-uri "survminer" version)) + (sha256 + (base32 + "1pdj3gs4aii8gn8wf4smbwmjymbzwkjwr3kxf90dxyy6i66mqq3v")))) + (properties `((upstream-name . "survminer"))) + (build-system r-build-system) + (propagated-inputs + `(("r-broom" ,r-broom) + ("r-dplyr" ,r-dplyr) + ("r-ggplot2" ,r-ggplot2) + ("r-ggpubr" ,r-ggpubr) + ("r-gridextra" ,r-gridextra) + ("r-magrittr" ,r-magrittr) + ("r-maxstat" ,r-maxstat) + ("r-purrr" ,r-purrr) + ("r-rlang" ,r-rlang) + ("r-scales" ,r-scales) + ("r-survival" ,r-survival) + ("r-survmisc" ,r-survmisc) + ("r-tibble" ,r-tibble) + ("r-tidyr" ,r-tidyr))) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page + "http://www.sthda.com/english/rpkgs/survminer/") + (synopsis + "Drawing Survival Curves using 'ggplot2'") + (description + "Contains the function @code{ggsurvplot()} for drawing easily +beautiful and 'ready-to-publish' survival curves with the 'number at +risk' table and 'censoring count plot'. Other functions are also +available to plot adjusted curves for `Cox` model and to visually +examine 'Cox' model assumptions.") + (license license:gpl2))) -- 2.17.1 From debbugs-submit-bounces@debbugs.gnu.org Fri Sep 11 05:07:09 2020 Received: (at 42107-done) by debbugs.gnu.org; 11 Sep 2020 09:07:09 +0000 Received: from localhost ([127.0.0.1]:42284 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kGf1R-00031P-6B for submit@debbugs.gnu.org; Fri, 11 Sep 2020 05:07:09 -0400 Received: from sender4-of-o51.zoho.com ([136.143.188.51]:21151) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kGf1P-00031F-02 for 42107-done@debbugs.gnu.org; Fri, 11 Sep 2020 05:07:07 -0400 ARC-Seal: i=1; a=rsa-sha256; t=1599815224; cv=none; d=zohomail.com; s=zohoarc; b=GPYYk6PZm3WjMy6JK2xmrN1+DbD1XxYHiQvejASu3Hb25rcBcmt2O/12rHD/U4uPENScsOlNoAZ4rxS+bcsSZ0HC0/4D73lEoIVZQoMdq45aeL9ozyzJLPIQR3E+Ku1IXcTO9hvE/8jPKX0X+LH4KtHjHQQSWi5ES0gdHxVpjLg= ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=zohomail.com; s=zohoarc; t=1599815224; h=Content-Type:Content-Transfer-Encoding:Cc:Date:From:In-Reply-To:MIME-Version:Message-ID:References:Subject:To; bh=qyaJHwhyCNRTniD1gjcc3DkpQa5ehhvhpM63Th6c43o=; b=Cmk1yhfY2qW67TphQx2hIho8I9PToGdMonDY/Jzl6a9+VTCGTrYu6maG7ZGmYQiUV7tKESNvOazeez2LUVH2i88xRYm9yl4HoIDmI3PmhBaEDqxERI538LvBx9yOVxJAEXAKBBEteAe54I5/SrnUAe6YsICmypqVjGY1MmPyfQA= ARC-Authentication-Results: i=1; mx.zohomail.com; dkim=pass header.i=elephly.net; spf=pass smtp.mailfrom=rekado@elephly.net; dmarc=pass header.from= header.from= DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; t=1599815224; s=zoho; d=elephly.net; i=rekado@elephly.net; h=References:From:To:Cc:Subject:In-reply-to:Date:Message-ID:MIME-Version:Content-Type:Content-Transfer-Encoding; bh=qyaJHwhyCNRTniD1gjcc3DkpQa5ehhvhpM63Th6c43o=; b=Ber0FGLA0zRqBLU/bVxGtXB5vcDpqDFJbPpSUNMivtfvNazzT8kSPyEVud+PRkzO zGooyDfdMEQhE+i6fuCxGHls+6TeP5syXz/ufP7hO+rA3yq0+Dryt6Ww0EoY5BE62DV 7GFl9zVA4tms1PO4ZpgRFjW24a3oSCAcU0uPPlg4= Received: from localhost (p54ad420a.dip0.t-ipconnect.de [84.173.66.10]) by mx.zohomail.com with SMTPS id 1599815223353405.2035374088887; Fri, 11 Sep 2020 02:07:03 -0700 (PDT) References: User-agent: mu4e 1.4.13; emacs 27.1 From: Ricardo Wurmus To: Lo Peter Subject: Re: [bug#42107] [PATCH] gnu: Add r-survminer and its dependencies In-reply-to: X-URL: https://elephly.net X-PGP-Key: https://elephly.net/rekado.pubkey X-PGP-Fingerprint: BCA6 89B6 3655 3801 C3C6 2150 197A 5888 235F ACAC Date: Fri, 11 Sep 2020 11:08:17 +0200 Message-ID: <878sdg3cla.fsf@elephly.net> MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-ZohoMailClient: External X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 42107-done Cc: 42107-done@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Hi Peter, > I am submitting a patch series of r-survminer and its dependencies. Thank you! I have re-indented the package definitions and updated their descriptions to match our guidelines. After making sure that the packages all build fine I pushed the patches to the =E2=80=9Cmaster=E2=80= =9D branch with commit 04e6851aa8. --=20 Ricardo From unknown Sat Jun 21 03:25:47 2025 Received: (at fakecontrol) by fakecontrolmessage; To: internal_control@debbugs.gnu.org From: Debbugs Internal Request Subject: Internal Control Message-Id: bug archived. Date: Fri, 09 Oct 2020 11:24:04 +0000 User-Agent: Fakemail v42.6.9 # This is a fake control message. # # The action: # bug archived. thanks # This fakemail brought to you by your local debbugs # administrator