Package: guix;
Reported by: Efraim Flashner <efraim <at> flashner.co.il>
Date: Tue, 21 Apr 2020 05:38:01 UTC
Severity: normal
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From: Efraim Flashner <efraim <at> flashner.co.il> To: Michael Zucchi <notzed <at> gmail.com> Cc: 40740 <at> debbugs.gnu.org, help-guix <at> gnu.org, zimon.toutoune <at> gmail.com Subject: bug#40740: guix build problem, no RUNPATH on libpthread.so Date: Tue, 21 Apr 2020 08:36:35 +0300
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CCing bug-guix
On Tue, Apr 21, 2020 at 09:41:47AM +0930, Michael Zucchi wrote:
>
> On 20/4/20 11:50 pm, zimoun wrote:
> > Dear,
> >
> > On Mon, 20 Apr 2020 at 11:56, Michael Zucchi <notzed <at> gmail.com> wrote:
> >
> > [...]
> >
> > > I ran guix environment guix --pure.
> > Which version (commit) of Guix do you use?
> > Could you provide the output of "guix describe"?
> >
> >
> > > Then I ran configure but it failed saying that guile 3.0 could not be
> > > found. After some poking i found this is provided by the guile-next
> > > package, so I had to manually install that. So the instructions didn't
> > > work right off the bat but configure then completed just fine.
> > Which commit of the repo are you trying to compile?
> >
> >
> > > However make then fails:
> > Depending on when was the last "guix pull" and when was the last "git
> > pull" and what you already compiled month ago, failing could happen;
> > especially because Guile has been updated from 2 to 3.
> >
> > After updating "guix pull" and "git pull", you could try:
> >
> > guix environment guix --pure
> > make distclean
> > ./configure --localstatedir=/var/
> > make
> >
> >
> > Hope that helps.
> >
> > All the best,
> > simon
> >
>
> Rather than stuff around repeating stuff I have already worked past
> successfully, I just deleted everything and started from scratch:
>
> - new guix checkout
> - blew away /gnu and /var/guix
> - install freshly from latest guix 1.1 binary install as listed in the
> online manual, it passed the signature check. https://guix.gnu.org/manual/en/html_node/Binary-Installation.html#Binary-Installation
> - re-ran demon, with --no-substitutes (users and groups were already
> there)
>
> But the first guix pull fails because it tries to run a 32 bit binary, so
> ultimately fails for the the same reason as detailed in my previous email.
>
> ...
> building
> /gnu/store/9g3mfjpxajl69krfwvdiaznz5gh54af2-guile-bootstrap-2.0.drv...
> builder for
> `/gnu/store/9g3mfjpxajl69krfwvdiaznz5gh54af2-guile-bootstrap-2.0.drv' failed
> with exit code 1
> build of /gnu/store/9g3mfjpxajl69krfwvdiaznz5gh54af2-guile-bootstrap-2.0.drv
> failed
> View build log at '/var/log/guix/drvs/9g/3mfjpxajl69krfwvdiaznz5gh54af2-guile-bootstrap-2.0.drv.bz2'.
> ...
> notzed <at> shitzone:~/src$ bzcat /var/log/guix/drvs/9g/3mfjpxajl69krfwvdiaznz5gh54af2-guile-bootstrap-2.0.drv.bz2
> while setting up the build environment: executing
> `/gnu/store/mzfkrxd4w8vqrmyrx169wj8wyw7r8i37-bash': Exec format error
>
> So I removed the --no-substitutes flag, restarted the demon, and re-ran guix
> pull and that ran to completion. Then I ran guix environment guix --pure
> and bootstrap.
>
> Now configure finds guile fine ('yay') but make still fails when linking
> guix for the same reason as before, see the previous email.
>
> MAKEINFO doc/guix-cookbook.info
> PO4A doc/guix-cookbook.de.texi
> /home/notzed/src/guix/build-aux/missing: line 81: po4a-translate: command
> not found
> WARNING: 'po4a-translate' is missing on your system.
> You might have modified some files without having the proper
> tools for further handling them. Check the 'README' file, it
> often tells you about the needed prerequisites for installing
> this package. You may also peek at any GNU archive site, in
> case some other package contains this missing 'po4a-translate'
> program.
> make[2]: [Makefile:5929: doc/guix-cookbook.de.texi] Error 127 (ignored)
> sed -i "s|guix-cookbook\.info|$(basename "doc/guix-cookbook.de.texi" | sed
> 's|texi$|info|')|" "doc/guix-cookbook.de.texi.tmp"
> sed: can't read doc/guix-cookbook.de.texi.tmp: No such file or directory
> make[2]: [Makefile:5930: doc/guix-cookbook.de.texi] Error 2 (ignored)
> POXREF doc/guix-cookbook.de.texi
> cat: doc/guix-cookbook.de.texi.tmp: No such file or directory
> mv "doc/guix-cookbook.de.texi.tmp" "doc/guix-cookbook.de.texi"
> mv: cannot stat 'doc/guix-cookbook.de.texi.tmp': No such file or directory
> make[2]: [Makefile:5932: doc/guix-cookbook.de.texi] Error 1 (ignored)
> MAKEINFO doc/guix-cookbook.de.info
> ./doc/guix-cookbook.de.texi: warning: document without nodes
> CXX nix/nix-daemon/guix_daemon-nix-daemon.o
> CXX nix/nix-daemon/guix_daemon-guix-daemon.o
> CXX nix/libstore/libstore_a-gc.o
> CXX nix/libstore/libstore_a-globals.o
> CXX nix/libstore/libstore_a-misc.o
> CXX nix/libstore/libstore_a-references.o
> CXX nix/libstore/libstore_a-store-api.o
> CXX nix/libstore/libstore_a-optimise-store.o
> CXX nix/libstore/libstore_a-local-store.o
> CXX nix/libstore/libstore_a-build.o
> CXX nix/libstore/libstore_a-pathlocks.o
> CXX nix/libstore/libstore_a-derivations.o
> CXX nix/libstore/libstore_a-builtins.o
> CXX nix/libstore/libstore_a-sqlite.o
> AR libstore.a
> CXX nix/libutil/libutil_a-archive.o
> CXX nix/libutil/libutil_a-affinity.o
> CXX nix/libutil/libutil_a-serialise.o
> CXX nix/libutil/libutil_a-util.o
> CXX nix/libutil/libutil_a-hash.o
> CXX nix/libutil/libutil_a-gcrypt-hash.o
> AR libutil.a
> CXX nix/boost/format/libformat_a-free_funcs.o
> CXX nix/boost/format/libformat_a-parsing.o
> CXX nix/boost/format/libformat_a-format_implementation.o
> AR libformat.a
> CXXLD guix-daemon
> /usr/bin/ld:
> /gnu/store/ahqgl4h89xqj695lgqvsaf6zh2nhy4pj-glibc-2.29/lib/libpthread.so.0:
> undefined reference to `__libc_vfork <at> GLIBC_PRIVATE'
> collect2: error: ld returned 1 exit status
> make[2]: *** [Makefile:3563: guix-daemon] Error 1
> make[2]: Leaving directory '/home/notzed/src/guix'
> make[1]: *** [Makefile:4930: all-recursive] Error 1
> make[1]: Leaving directory '/home/notzed/src/guix'
> make: *** [Makefile:3351: all] Error 2
> notzed <at> shitzone:~/src/guix$
>
>
> notzed <at> shitzone:~/src/guix$ git describe
> v1.1.0-440-gce5f4701d1
>
> notzed <at> shitzone:~/src/guix$ guix describe
> Generation 1 Apr 21 2020 09:19:55 (current)
> guix ce5f470
> repository URL: https://git.savannah.gnu.org/git/guix.git
> branch: master
> commit: ce5f4701d1e5c88c622a0d05a96ddfb31c117455
>
>
>
--
Efraim Flashner <efraim <at> flashner.co.il> אפרים פלשנר
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