From unknown Sat Jun 21 03:13:09 2025 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable MIME-Version: 1.0 X-Mailer: MIME-tools 5.509 (Entity 5.509) Content-Type: text/plain; charset=utf-8 From: bug#36796 <36796@debbugs.gnu.org> To: bug#36796 <36796@debbugs.gnu.org> Subject: Status: [PATCH 07/11] gnu: Add r-flowmeans. Reply-To: bug#36796 <36796@debbugs.gnu.org> Date: Sat, 21 Jun 2025 10:13:09 +0000 retitle 36796 [PATCH 07/11] gnu: Add r-flowmeans. reassign 36796 guix-patches submitter 36796 zimoun severity 36796 normal tag 36796 patch thanks From debbugs-submit-bounces@debbugs.gnu.org Wed Jul 24 14:22:33 2019 Received: (at submit) by debbugs.gnu.org; 24 Jul 2019 18:22:33 +0000 Received: from localhost ([127.0.0.1]:37993 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1hqLuL-0005MU-Cc for submit@debbugs.gnu.org; Wed, 24 Jul 2019 14:22:33 -0400 Received: from lists.gnu.org ([209.51.188.17]:48146) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1hqLuG-0005LM-1R for submit@debbugs.gnu.org; Wed, 24 Jul 2019 14:22:28 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:41112) by lists.gnu.org with esmtp (Exim 4.86_2) (envelope-from ) id 1hqLuF-0003J1-0q for guix-patches@gnu.org; Wed, 24 Jul 2019 14:22:27 -0400 X-Spam-Checker-Version: SpamAssassin 3.3.2 (2011-06-06) on eggs.gnu.org X-Spam-Level: X-Spam-Status: No, score=0.8 required=5.0 tests=BAYES_50,FREEMAIL_FROM, URIBL_BLOCKED autolearn=disabled version=3.3.2 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1hqLuD-0007Hc-Ui for guix-patches@gnu.org; Wed, 24 Jul 2019 14:22:26 -0400 Received: from mail-wr1-x433.google.com ([2a00:1450:4864:20::433]:33645) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1hqLuD-0007GY-Oh for guix-patches@gnu.org; Wed, 24 Jul 2019 14:22:25 -0400 Received: by mail-wr1-x433.google.com with SMTP id n9so48094525wru.0 for ; Wed, 24 Jul 2019 11:22:25 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references :mime-version:content-transfer-encoding; bh=0foQD19vAMQrvcRH4ETjIMv5JzK13UlFkevMaKX88ck=; b=Yt14iPtbAHIlIr2twiukipiepKskFRoRYJ/6HzWUFW5fvCsTXeBOpSZz7CZUsYrrlm ZFD7kF9lgOsUKspSIF1OI1oAgZhZgv75HxtW7EbEWGN8iKVMDv3qV90DaOUEH+wzqd9D kx38SdkCvN/OKI7ysV186CWXTl7GDm0EeTLtVx5l7d2rQm/1MUh57dIXHXPI9yy38328 ko5VqPXzudjbBlwQz4DcvBywjknBddDDHpqvGxAFQz5Kl6f83HqEWCGFuJbkei9AK3/a iMBFvlj9CRerYSWVFyvHnAQDdycwiAYLoEODX8amswODkWOC99CmLHTvjJFjSkT4p0MX GTBA== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references:mime-version:content-transfer-encoding; bh=0foQD19vAMQrvcRH4ETjIMv5JzK13UlFkevMaKX88ck=; b=iR9UAloC+ZMj/NVRecf34BLin0gQsUX2qzezTmF6aQ/Lc5jmRZu+haAyzJ4iE2vQmZ fqZ/EHwUsPs1rPasgalXPgHESRtl5tNLNM6QNFFbglih09gDMFxREMoIpJIFXJk+CJFC /aPKi0jzefN4M1EbawsrKqUH+iqVY6qrQ23Tq8EKLr6gWHSCWNdT1JNJwSJTP9urhe59 sXendYIJiHK5aMW5eZiMHOozx61D+h6qnVcBDL1mJ8lOKeFUT462eKGjEwfYM7YZxwgK EPzNXBVUDIVrb3+7MfcURv2CgmJgx8uTd2y9dZTTd2APWnF/1YuTW1D6q8T7JQO4X1// fWww== X-Gm-Message-State: APjAAAXDFAs784XTgUyXz5UZGIUgjF5Cm2h2f+uxcl/jVtFFy7rdCLiN rcYAzQnxtDPHhd4GRnpIebc++rNO X-Google-Smtp-Source: APXvYqwYq0dfkdXt1gxoLntVS7kilXWftZ8hRBQZHMCpQ13GcBfbe/RIAbN0UZldoS/eSElsqWN9Aw== X-Received: by 2002:a5d:51c8:: with SMTP id n8mr78520379wrv.46.1563992544648; Wed, 24 Jul 2019 11:22:24 -0700 (PDT) Received: from pfiuh02.univ-paris-diderot.fr ([193.48.40.241]) by smtp.gmail.com with ESMTPSA id g12sm66116616wrv.9.2019.07.24.11.22.23 (version=TLS1_2 cipher=ECDHE-RSA-AES128-GCM-SHA256 bits=128/128); Wed, 24 Jul 2019 11:22:24 -0700 (PDT) From: zimoun To: guix-patches@gnu.org Subject: [PATCH 07/11] gnu: Add r-flowmeans. Date: Wed, 24 Jul 2019 20:22:00 +0200 Message-Id: <20190724182204.6818-8-zimon.toutoune@gmail.com> X-Mailer: git-send-email 2.22.0 In-Reply-To: <20190724182204.6818-1-zimon.toutoune@gmail.com> References: <20190724182204.6818-1-zimon.toutoune@gmail.com> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-detected-operating-system: by eggs.gnu.org: Genre and OS details not recognized. X-Received-From: 2a00:1450:4864:20::433 X-Spam-Score: -1.3 (-) X-Debbugs-Envelope-To: submit Cc: zimoun X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.3 (--) * gnu/packages/bioconductor.scm (r-flowmeans): New variable. --- gnu/packages/bioconductor.scm | 26 ++++++++++++++++++++++++++ 1 file changed, 26 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index d5bd512972..0f023665c2 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -4881,3 +4881,29 @@ and to both short and long sequence reads.") (description "Provides S4 data structures and basic functions to deal with flow cytometry data.") (license license:artistic2.0))) + +(define-public r-flowmeans + (package + (name "r-flowmeans") + (version "1.44.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "flowMeans" version)) + (sha256 + (base32 + "0yp6y3mq5h4nf1d7ybqnriigwfmwanrqavpj3ry482sgiaip1hp2")))) + (properties `((upstream-name . "flowMeans"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biobase" ,r-biobase) + ("r-feature" ,r-feature) + ("r-flowcore" ,r-flowcore) + ("r-rrcov" ,r-rrcov))) + (home-page + "https://bioconductor.org/packages/flowMeans") + (synopsis + "Non-parametric Flow Cytometry Data Gating") + (description + "Identifies cell populations in Flow Cytometry data using non-parametric clustering and segmented-regression-based change point detection. Note: R 2.11.0 or newer is required.") + (license license:artistic2.0))) -- 2.21.0 From debbugs-submit-bounces@debbugs.gnu.org Wed Jul 24 14:36:31 2019 Received: (at control) by debbugs.gnu.org; 24 Jul 2019 18:36:31 +0000 Received: from localhost ([127.0.0.1]:38044 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1hqM7q-0005tE-Mh for submit@debbugs.gnu.org; Wed, 24 Jul 2019 14:36:31 -0400 Received: from tobias.gr ([80.241.217.52]:34870) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1hqM7o-0005t1-Oj for control@debbugs.gnu.org; Wed, 24 Jul 2019 14:36:29 -0400 Received: by tobias.gr (OpenSMTPD) with ESMTP id 65ffc8bb for ; Wed, 24 Jul 2019 18:36:28 +0000 (UTC) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed; d=tobias.gr; h=from:to :date:message-id:mime-version:content-type; s=2018; i= me@tobias.gr; bh=snX8gkIGwvvMEOtUu1R0ewv6IhNBYe75nf1jTlPDTEg=; b= SKr2Nv4IaVdOgC7U4A5T1waVQ3bmHeD75MNbHb6ontzKUAnC6AyGAK69j7/mLSyq n5TkkJZbjt4m+cMYNmomsc7Jb8jfsrESeUhfOx6FFLs2CiDgGn3nppkYdKFCyieN 6Dx1nzpofFJCIu8XT/N6hGOtrt0H2heZAaRoK+X/o/u9/rFUrUC3cGKJMvs5wicm +hXhxFncsAid/LS+/6qt464n6YFucXB15p9Y4vpfsrh39E2tXATEVI3jXVhsl0I3 AZoN5GIDMLw1lsqgIrZBUJcC8EjaNpNamWID3v7BJWjq/sfaCz+n/b1H1MdkLo0X 9z3P1vmgpYkapiHIfOxzSQ== Received: by submission.tobias.gr (OpenSMTPD) with ESMTPSA id aaceb1cb (TLSv1.2:ECDHE-RSA-AES256-GCM-SHA384:256:NO) for ; 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