From unknown Fri Jun 20 18:09:52 2025 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable MIME-Version: 1.0 X-Mailer: MIME-tools 5.509 (Entity 5.509) Content-Type: text/plain; charset=utf-8 From: bug#36794 <36794@debbugs.gnu.org> To: bug#36794 <36794@debbugs.gnu.org> Subject: Status: [PATCH 05/11] gnu: Add r-flowutils. Reply-To: bug#36794 <36794@debbugs.gnu.org> Date: Sat, 21 Jun 2025 01:09:52 +0000 retitle 36794 [PATCH 05/11] gnu: Add r-flowutils. reassign 36794 guix-patches submitter 36794 zimoun severity 36794 normal tag 36794 patch thanks From debbugs-submit-bounces@debbugs.gnu.org Wed Jul 24 14:22:32 2019 Received: (at submit) by debbugs.gnu.org; 24 Jul 2019 18:22:32 +0000 Received: from localhost ([127.0.0.1]:37989 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1hqLuK-0005MC-Fa for submit@debbugs.gnu.org; Wed, 24 Jul 2019 14:22:32 -0400 Received: from lists.gnu.org ([209.51.188.17]:54749) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1hqLuE-0005L9-C3 for submit@debbugs.gnu.org; Wed, 24 Jul 2019 14:22:26 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:41084) by lists.gnu.org with esmtp (Exim 4.86_2) (envelope-from ) id 1hqLuD-0003I5-8B for guix-patches@gnu.org; Wed, 24 Jul 2019 14:22:26 -0400 X-Spam-Checker-Version: SpamAssassin 3.3.2 (2011-06-06) on eggs.gnu.org X-Spam-Level: X-Spam-Status: No, score=0.8 required=5.0 tests=BAYES_50,FREEMAIL_FROM autolearn=disabled version=3.3.2 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1hqLuC-0007Ex-AZ for guix-patches@gnu.org; Wed, 24 Jul 2019 14:22:25 -0400 Received: from mail-wr1-x42d.google.com ([2a00:1450:4864:20::42d]:33639) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1hqLuC-0007Do-3W for guix-patches@gnu.org; Wed, 24 Jul 2019 14:22:24 -0400 Received: by mail-wr1-x42d.google.com with SMTP id n9so48094453wru.0 for ; Wed, 24 Jul 2019 11:22:24 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references :mime-version:content-transfer-encoding; bh=OSpLDtjNGjfHmKRoGp1RTvE1NGPzUJ5XElI50Q6CEgw=; b=iegAibzrIREiO2fEUC8nsqr/ZpvTb4LNilB7sQXLjOV7c3LtbKvApSV20IiU0xQRk8 6Rltj5m7r1iwW2nLAO5227OcYLiOJtZ7kDY3to/1tQKMRJz9Grgo0gKz4mwRpG+jiJ2m tIokIp4HTZ+yZ1FJBzPe/hv9cywbLj0qoMSfecGfvxeJe4FWnYJMC/Rv6bj+1+JsMh0c exB64vzd7SbYzpEmx5NLgUHQO/qjCh0EpEFER9nNdNQNLtwwiNa0Pj5fJ52Ib3u+WbRz 4X2cYHvpD1qXQ2BMONNs1UOlcwEbaoIB6vLGJctLuflZ/DAnnCbAuodp6dkrONzqCGac rG5w== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references:mime-version:content-transfer-encoding; bh=OSpLDtjNGjfHmKRoGp1RTvE1NGPzUJ5XElI50Q6CEgw=; b=GgzU5p31ukxyJ40bTvhG7s4H5YDWTgOIDhoPTAlp6K2MMoxTrrmK2bD17Ru+D/yuTU MhpfVDjppGpNiztwKKHRgtbLDMi/PqI8hw5MgRPwhebLXC/Yg3LtK2lY1DNr90aBQeCv dbZpKuZYNMBTHZFEWhKyOanNBjuEyG9Aqj1zmUyaaS8Iea0k8nb4whSgcYuD7b69yZCj j2HObMAZ5PM9fbB4Fkgn6ZIpT2qhA8U6v9i7Kam60CzU189Pq7zSmUH97Tqp9xemujkb OLwX5NzO0/XT9CAUiYEGCbkwCrG4i0sIgznTOfhfOz0DPgQNFP7de/eWtZaVKbFMuxmq U0Tg== X-Gm-Message-State: APjAAAWiwiHI4fCHNVMeuXV3FUO8PeYZnYp0GJL2aCTwAQcggqrCha0h vMNYFunmlg4w5nQkdqo/nNXnq8+M X-Google-Smtp-Source: APXvYqzDEnKHSSGDJ2R+27497B6eZ63kVT1UTmRh53JrwGtXP6YT1Y0UQw6blGZ/M63N0NOOA7KPpg== X-Received: by 2002:adf:de10:: with SMTP id b16mr55952468wrm.296.1563992542948; Wed, 24 Jul 2019 11:22:22 -0700 (PDT) Received: from pfiuh02.univ-paris-diderot.fr ([193.48.40.241]) by smtp.gmail.com with ESMTPSA id g12sm66116616wrv.9.2019.07.24.11.22.22 (version=TLS1_2 cipher=ECDHE-RSA-AES128-GCM-SHA256 bits=128/128); Wed, 24 Jul 2019 11:22:22 -0700 (PDT) From: zimoun To: guix-patches@gnu.org Subject: [PATCH 05/11] gnu: Add r-flowutils. Date: Wed, 24 Jul 2019 20:21:58 +0200 Message-Id: <20190724182204.6818-6-zimon.toutoune@gmail.com> X-Mailer: git-send-email 2.22.0 In-Reply-To: <20190724182204.6818-1-zimon.toutoune@gmail.com> References: <20190724182204.6818-1-zimon.toutoune@gmail.com> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-detected-operating-system: by eggs.gnu.org: Genre and OS details not recognized. X-Received-From: 2a00:1450:4864:20::42d X-Spam-Score: -1.3 (-) X-Debbugs-Envelope-To: submit Cc: zimoun X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.3 (--) * gnu/packages/bioconductor.scm (r-flowutils): New variable. --- gnu/packages/bioconductor.scm | 27 +++++++++++++++++++++++++++ 1 file changed, 27 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 3a38042537..d79ff729fc 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -4800,6 +4800,33 @@ gene fusion discovery. It can be applied to all major sequencing techologies and to both short and long sequence reads.") (license license:gpl3))) +(define-public r-flowutils + (package + (name "r-flowutils") + (version "1.48.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "flowUtils" version)) + (sha256 + (base32 + "1r7b0rszdzjq7jphh65p5m4x5ps0zbbagxl26gn2mapbjdyb47rm")))) + (properties `((upstream-name . "flowUtils"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biobase" ,r-biobase) + ("r-corpcor" ,r-corpcor) + ("r-flowcore" ,r-flowcore) + ("r-graph" ,r-graph) + ("r-runit" ,r-runit) + ("r-xml" ,r-xml))) + (home-page + "https://github.com/jspidlen/flowUtils") + (synopsis "Utilities for flow cytometry") + (description + "Provides utilities for flow cytometry data.") + (license license:artistic2.0))) + (define-public r-flowcore (package (name "r-flowcore") -- 2.21.0 From debbugs-submit-bounces@debbugs.gnu.org Wed Jul 24 14:36:31 2019 Received: (at control) by debbugs.gnu.org; 24 Jul 2019 18:36:31 +0000 Received: from localhost ([127.0.0.1]:38044 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1hqM7q-0005tE-Mh for submit@debbugs.gnu.org; Wed, 24 Jul 2019 14:36:31 -0400 Received: from tobias.gr ([80.241.217.52]:34870) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1hqM7o-0005t1-Oj for control@debbugs.gnu.org; Wed, 24 Jul 2019 14:36:29 -0400 Received: by tobias.gr (OpenSMTPD) with ESMTP id 65ffc8bb for ; 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