Subject: [bug#36623] [PATCH] gnu: gdal: add python support

From: Arne Babenhauserheide <[email-masked]>
Date: Wed, 17 Jul 2019 18:22:51 +0200

Ludovic Courtès <[email-masked]> writes:

> Hello!
>
> Complementing Julien’s feedback…
>
> Arne Babenhauserheide <[email-masked]> skribis:
>
>> From 5f8b1dc1bb5ce7b061bcca10174f9330cf89696c Mon Sep 17 00:00:00 2001
>> From: Arne Babenhauserheide <[email-masked]>
>> Date: Sat, 11 May 2019 15:16:22 +0200
>> Subject: [PATCH] gnu: gdal: add python support
>>
>> * gnu/packages/geo.scm (gdal): add python support
>> ---
>>  gnu/packages/geo.scm | 29 +++++++++++++++++++++++++++--
>>  1 file changed, 27 insertions(+), 2 deletions(-)
>>
>> diff --git a/gnu/packages/geo.scm b/gnu/packages/geo.scm
>> index 4cccd97643..a6942d2a45 100644
>> --- a/gnu/packages/geo.scm
>> +++ b/gnu/packages/geo.scm
>> @@ -537,6 +537,8 @@ development.")
>>      (build-system gnu-build-system)
>>      (arguments
>>       `(#:tests? #f
>> +       ;; validating runpath does not work yet for Python, so skip this phase.
>> +       #:validate-runpath? #f
>
> What happens when you let the ‘validate-runpath’ phase run?

\ 'validate-runpath' phasebuilder for `/gnu/store/ykfnx8m38ndnggdqsv1fbgf3ycry5f88-gdal-2.2.4.drv' failed with exit code 1
build of /gnu/store/ykfnx8m38ndnggdqsv1fbgf3ycry5f88-gdal-2.2.4.drv failed
View build log at '/var/log/guix/drvs/yk/fnx8m38ndnggdqsv1fbgf3ycry5f88-gdal-2.2.4.drv.bz2'.

…
starting phase `validate-runpath'
validating RUNPATH of 6 binaries in "/gnu/store/q9sb0wv41ig429f1m1xspg22xm8pwpwh-gdal-2.2.4/lib"...
/gnu/store/q9sb0wv41ig429f1m1xspg22xm8pwpwh-gdal-2.2.4/lib/python3.7/site-packages/osgeo/_gdal.cpython-37m-x86_64-linux-gnu.so: error: depends on 'libgdal.so.20', which cannot be found in RUNPATH ("/gnu/store/b7fqhszxl02g6pfm3vw6b3cjz472qrly-python-3.7.0/lib" "/gnu/store/h90vnqw0nwd0hhm1l5dgxsdrigddfmq4-glibc-2.28/lib" "/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib" "/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/../../..")
/gnu/store/q9sb0wv41ig429f1m1xspg22xm8pwpwh-gdal-2.2.4/lib/python3.7/site-packages/osgeo/_gdalconst.cpython-37m-x86_64-linux-gnu.so: error: depends on 'libgdal.so.20', which cannot be found in RUNPATH ("/gnu/store/b7fqhszxl02g6pfm3vw6b3cjz472qrly-python-3.7.0/lib" "/gnu/store/h90vnqw0nwd0hhm1l5dgxsdrigddfmq4-glibc-2.28/lib" "/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib" "/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/../../..")
/gnu/store/q9sb0wv41ig429f1m1xspg22xm8pwpwh-gdal-2.2.4/lib/python3.7/site-packages/osgeo/_gnm.cpython-37m-x86_64-linux-gnu.so: error: depends on 'libgdal.so.20', which cannot be found in RUNPATH ("/gnu/store/b7fqhszxl02g6pfm3vw6b3cjz472qrly-python-3.7.0/lib" "/gnu/store/h90vnqw0nwd0hhm1l5dgxsdrigddfmq4-glibc-2.28/lib" "/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib" "/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/../../..")
/gnu/store/q9sb0wv41ig429f1m1xspg22xm8pwpwh-gdal-2.2.4/lib/python3.7/site-packages/osgeo/_ogr.cpython-37m-x86_64-linux-gnu.so: error: depends on 'libgdal.so.20', which cannot be found in RUNPATH ("/gnu/store/b7fqhszxl02g6pfm3vw6b3cjz472qrly-python-3.7.0/lib" "/gnu/store/h90vnqw0nwd0hhm1l5dgxsdrigddfmq4-glibc-2.28/lib" "/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib" "/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/../../..")
/gnu/store/q9sb0wv41ig429f1m1xspg22xm8pwpwh-gdal-2.2.4/lib/python3.7/site-packages/osgeo/_osr.cpython-37m-x86_64-linux-gnu.so: error: depends on 'libgdal.so.20', which cannot be found in RUNPATH ("/gnu/store/b7fqhszxl02g6pfm3vw6b3cjz472qrly-python-3.7.0/lib" "/gnu/store/h90vnqw0nwd0hhm1l5dgxsdrigddfmq4-glibc-2.28/lib" "/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib" "/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/../../..")
validating RUNPATH of 24 binaries in "/gnu/store/q9sb0wv41ig429f1m1xspg22xm8pwpwh-gdal-2.2.4/bin"...
Backtrace:
           5 (primitive-load "/gnu/store/kzsb94cspp48r9l26y8gv9zy6la…")
In ice-9/eval.scm:
   191:35  4 (_ _)
In srfi/srfi-1.scm:
   863:16  3 (every1 #<procedure 817960 at /gnu/store/gfprsx2m62cvq…> …)
In /gnu/store/gfprsx2m62cvqbh7ysc9ay9slhijvmal-module-import/guix/build/gnu-build-system.scm:
   799:28  2 (_ _)
   558:10  1 (validate-runpath #:validate-runpath? _ # _ #:outputs _)
In unknown file:
           0 (scm-error misc-error #f "~A" ("RUNPATH validation fa…") …)

ERROR: In procedure scm-error:
RUNPATH validation failed

Best wishes,
Arne
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