Subject: bug#34935: closed (Re: bug#34935: nanopolish is not reproducible)

From: [email-masked] (GNU bug Tracking System)
Date: Wed, 13 Jan 2021 15:54:02 +0000

Your bug report

#34935: nanopolish is not reproducible

which was filed against the guix package, has been closed.

The explanation is attached below, along with your original report.
If you require more details, please reply to [email-masked].

-- 
34935: http://debbugs.gnu.org/cgi/bugreport.cgi?bug=34935
GNU Bug Tracking System
Contact [email-masked] with problems

Subject: Re: bug#34935: nanopolish is not reproducible
From: Maxim Cournoyer <[email-masked]>
To: [email-masked]
Date: Wed, 13 Jan 2021 10:53:22 -0500
List-Id: <debbugs-submit.debbugs.gnu.org>

This is no longer an issue.

Closing.

Maxim

Subject: nanopolish is not reproducible
From: Maxim Cournoyer <[email-masked]>
To: bug-guix <[email-masked]>
Date: Wed, 20 Mar 2019 23:11:41 -0400
List-Id: <debbugs-submit.debbugs.gnu.org>

$ guix build --check --no-grafts nanopolish
[...]
guix build: error: derivation `/gnu/store/7hzcmcwlw83f0wsqmz9nnl1ah54kwks4-nanopolish-0.10.2-1.50e8b5c.drv' may not be deterministic: output `/gnu/store/m7icaq7642zy0gvnqvymcnn8d088a9s0-nanopolish-0.10.2-1.50e8b5c' differs

$ diffoscope "$(guix build nanopolish)" /gnu/store/m7icaq7642zy0gvnqvymcnn8d088a9s0-nanopolish-0.10.2-1.50e8b5c

--8<---------------cut here---------------start------------->8---
│ │ │ - 0x000000000000001d (RUNPATH)            Library runpath: [/gnu/store/h90vnqw0nwd0hhm1l5dgxsdrigddfmq4-glibc-2.28/lib:/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib:/gnu/store/nq4lsyipmfb0q7g26ra45rwwqrh3x8zw-zlib-1.2.11/lib:/gnu/store/36i633snnhx4mgbnmm5rbkgk3qdi32ka-hdf5-1.8.21/lib:/gnu/store/x4xpcpsqmini25gkrc0h945ml9r609v5-htslib-1.9/lib:/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/../../..]
│ │ │ + 0x000000000000001d (RUNPATH)            Library runpath: [/gnu/store/h90vnqw0nwd0hhm1l5dgxsdrigddfmq4-glibc-2.28/lib:/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib:/gnu/store/nq4lsyipmfb0q7g26ra45rwwqrh3x8zw-zlib-1.2.11/lib:/gnu/store/36i633snnhx4mgbnmm5rbkgk3qdi32ka-hdf5-1.8.21/lib:/gnu/store/d25i834bs8wvg8mh36bplxg61r6b7vz9-htslib-1.9/lib:/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib/gcc/x86_64-unknown-linux-gnu/5.5.0/../../..]
--8<---------------cut here---------------end--------------->8---

The problem seems to lie in htslib.