From unknown Fri Jun 20 19:49:15 2025 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable MIME-Version: 1.0 X-Mailer: MIME-tools 5.509 (Entity 5.509) Content-Type: text/plain; charset=utf-8 From: bug#34388 <34388@debbugs.gnu.org> To: bug#34388 <34388@debbugs.gnu.org> Subject: Status: [PATCH] gnu: openmpi: Upgrade to 4.0.0. Reply-To: bug#34388 <34388@debbugs.gnu.org> Date: Sat, 21 Jun 2025 02:49:15 +0000 retitle 34388 [PATCH] gnu: openmpi: Upgrade to 4.0.0. reassign 34388 guix-patches submitter 34388 ericbavier@centurylink.net severity 34388 normal tag 34388 patch thanks From debbugs-submit-bounces@debbugs.gnu.org Fri Feb 08 10:07:09 2019 Received: (at submit) by debbugs.gnu.org; 8 Feb 2019 15:07:09 +0000 Received: from localhost ([127.0.0.1]:40043 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1gs7k7-00087i-25 for submit@debbugs.gnu.org; Fri, 08 Feb 2019 10:07:09 -0500 Received: from eggs.gnu.org ([209.51.188.92]:59548) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1gs7k4-00087E-Dk for submit@debbugs.gnu.org; Fri, 08 Feb 2019 10:07:01 -0500 Received: from lists.gnu.org ([209.51.188.17]:51383) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32) (Exim 4.71) (envelope-from ) id 1gs7jz-0004jI-Ap for submit@debbugs.gnu.org; Fri, 08 Feb 2019 10:06:55 -0500 Received: from eggs.gnu.org ([209.51.188.92]:45605) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1gs7jv-0002N0-4e for guix-patches@gnu.org; Fri, 08 Feb 2019 10:06:55 -0500 X-Spam-Checker-Version: SpamAssassin 3.3.2 (2011-06-06) on eggs.gnu.org X-Spam-Level: X-Spam-Status: No, score=0.8 required=5.0 tests=BAYES_50,FREEMAIL_FROM, MIME_QP_LONG_LINE,URIBL_BLOCKED autolearn=disabled version=3.3.2 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1gs7ju-0004bT-2Z for guix-patches@gnu.org; Fri, 08 Feb 2019 10:06:51 -0500 Received: from mail.onyx.syn-alias.com ([206.152.134.66]:33530 helo=smtp.centurylink.net) by eggs.gnu.org with esmtps (TLS1.0:DHE_RSA_AES_256_CBC_SHA1:32) (Exim 4.71) (envelope-from ) id 1gs7jt-0004R6-RY for guix-patches@gnu.org; Fri, 08 Feb 2019 10:06:50 -0500 DKIM-Signature: v=1; a=rsa-sha1; d=centurylink.net; s=ctl201402; c=relaxed/simple; q=dns/txt; i=@centurylink.net; t=1549638393; h=From:Subject:Date:To:MIME-Version:Content-Type; bh=jJ29nWGIafp2Jmo5z2A82bzkrS8=; b=HoqLpupd9YzrFA++kOMWArknpQXNX/8AK9Kd8UuJblfxRe3gMdzz9lk/mqEY84Ti lE21D4hDNkcdPe3uS9xvSjmxzOCDbrWqKj99nQXjWMfh4wV9tFuzq4LyagfvbhBK k4al9Fu5cWIjG/MJOEMyBqct8ASdqCYvI2qTTwedPgOlp24ulLsxb4ha1HKZOeWg WO8W/oM3sLtnsbMdPVmZ8+7Ojsw5KHZFtYaWcszX0e3YhDZJsksJKRtc7FeT61u/ YePwozpeAggAmm9xWuU2SS3KPgUP5/JPdkV2yhn4FgosiVFvRsPE3wRL0+FbzqfG 6qpAQsh2GUWxK+YVffZorQ==; X_CMAE_Category: , , X-CNFS-Analysis: v=2.3 cv=PIBxBsiC c=1 sm=1 tr=0 a=QyxltsrUb1TgOUMZEPHifA==:117 a=QyxltsrUb1TgOUMZEPHifA==:17 a=KGjhK52YXX0A:10 a=IkcTkHD0fZMA:10 a=CFTnQlWoA9kA:10 a=zSv6zi-ZgakA:10 a=inoG4m36AAAA:8 a=mDV3o1hIAAAA:8 a=l-IQEoNTAAAA:8 a=amw3c8rLHUIdlXkanTEA:9 a=QEXdDO2ut3YA:10 a=_Qgj-RFg6mImvLaOgLPg:22 a=_FVE-zBwftR9WsbkzFJk:22 a=Zd05aFOJ2-iJ9B18dslr:22 X-CM-Score: 0 X-Scanned-by: Cloudmark Authority Engine X-Authed-Username: ZXJpY2JhdmllckBjZW50dXJ5bGluay5uZXQ= Authentication-Results: smtp01.onyx.dfw.sync.lan smtp.user=ericbavier@centurylink.net; auth=pass (LOGIN) Received: from [97.116.114.155] ([97.116.114.155:37522] helo=localhost.localdomain) by smtp.centurylink.net (envelope-from ) (ecelerity 3.6.25.56547 r(Core:3.6.25.0)) with ESMTPSA (cipher=DHE-RSA-AES128-GCM-SHA256) id 51/85-30226-9FA9D5C5; Fri, 08 Feb 2019 10:06:33 -0500 From: ericbavier@centurylink.net To: guix-patches@gnu.org Subject: [PATCH] gnu: openmpi: Upgrade to 4.0.0. Date: Fri, 8 Feb 2019 09:06:22 -0600 Message-Id: <20190208150622.11377-1-ericbavier@centurylink.net> X-Mailer: git-send-email 2.20.1 MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Length: 5542 Content-Transfer-Encoding: quoted-printable X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.6.x X-Received-From: 206.152.134.66 X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.6.x X-Spam-Score: 1.0 (+) X-Debbugs-Envelope-To: submit Cc: Eric Bavier X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -0.0 (/) From: Eric Bavier * gnu/packages/linux.scm (psm)[arguments]: Add 'patch-sysmacros phase to fix "undefined reference to `minor'" errors while linking against libinfinipath.so. * gnu/packages/mpi.scm (openmpi): Upgrade to 4.0.0. [inputs]: Add libevent. [arguments]: Simplify configure-flags. Use system libevent. Adjust romio version strings. (%openmpi-setup): Use OMPI_MCA_rmaps_base_mapping_policy for oversubscription. --- gnu/packages/linux.scm | 7 +++++++ gnu/packages/mpi.scm | 29 +++++++++++++---------------- 2 files changed, 20 insertions(+), 16 deletions(-) diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index b1dfb7f701..66a1ad4508 100644 --- a/gnu/packages/linux.scm +++ b/gnu/packages/linux.scm @@ -4717,6 +4717,13 @@ libraries, which are often integrated directly into libfabric.") (string-append %output "/include"))) (substitute* "Makefile" (("/lib64") "/lib")) + #t)) + (add-after 'unpack 'patch-sysmacros + (lambda _ + (substitute* "ipath/ipath_proto.c" + (("#include " m) + (string-append m "\n" + "#include "))) #t))))) (synopsis "Intel Performance Scaled Messaging (PSM) Libraries") (description diff --git a/gnu/packages/mpi.scm b/gnu/packages/mpi.scm index 1f69a04bc9..0a43c55b7a 100644 --- a/gnu/packages/mpi.scm +++ b/gnu/packages/mpi.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright =C2=A9 2014, 2015, 2018 Eric Bavier +;;; Copyright =C2=A9 2014, 2015, 2018, 2019 Eric Bavier ;;; Copyright =C2=A9 2014, 2015, 2016, 2017, 2018, 2019 Ludovic Court=C3=A8s ;;; Copyright =C2=A9 2014 Ian Denhardt ;;; Copyright =C2=A9 2016 Andreas Enge @@ -33,6 +33,7 @@ #:use-module (guix build-system python) #:use-module (gnu packages) #:use-module (gnu packages gcc) + #:use-module (gnu packages libevent) #:use-module (gnu packages linux) #:use-module (gnu packages pciutils) #:use-module (gnu packages xorg) @@ -157,7 +158,7 @@ bind processes, and much more.") (define-public openmpi (package (name "openmpi") - (version "3.0.1") + (version "4.0.0") (source (origin (method url-fetch) @@ -166,12 +167,13 @@ bind processes, and much more.") "/downloads/openmpi-" version ".tar.bz2")) (sha256 (base32 - "0pbqrm5faf57nasy1s81wqivl7zvxmv8lzjh8hvb0f3qxv8m0d36")))) + "0srnjwzsmyhka9hhnmqm86qck4w3xwjm8g6sbns58wzbrwv8l2rg")))) (build-system gnu-build-system) (inputs `(("hwloc" ,hwloc "lib") ("gfortran" ,gfortran) ("libfabric" ,libfabric) + ("libevent" ,libevent) ,@(if (and (not (%current-target-system)) (member (%current-system) (package-supported-systems psm))) `(("psm" ,psm)) @@ -191,16 +193,11 @@ bind processes, and much more.") `(#:configure-flags `("--enable-mpi-ext=3Daffinity" ;cr doesn't work "--enable-memchecker" "--with-sge" - - ;; VampirTrace is obsoleted by scorep and disabling - ;; it reduces the closure size considerably. - "--disable-vt" - - ,(string-append "--with-valgrind=3D" - (assoc-ref %build-inputs "valgrind")) - ,(string-append "--with-hwloc=3D" - (assoc-ref %build-inputs "hwloc")) - + "--with-psm" + "--with-psm2" + "--with-valgrind" + "--with-hwloc=3Dexternal" + "--with-libevent" ;; Enable support for SLURM's Process Manager ;; Interface (PMI). ,(string-append "--with-pmi=3D" @@ -219,8 +216,8 @@ bind processes, and much more.") (("_ABSOLUTE") "")) ;; Avoid valgrind (which pulls in gdb etc.). (substitute* - '("./ompi/mca/io/romio314/src/io_romio314_component.c") - (("MCA_io_romio314_COMPLETE_CONFIGURE_FLAGS") + '("./ompi/mca/io/romio321/src/io_romio321_component.c") + (("MCA_io_romio321_COMPLETE_CONFIGURE_FLAGS") "\"[elided to reduce closure]\"")) #t)) (add-before 'build 'scrub-timestamps ;reproducibility @@ -270,7 +267,7 @@ only provides @code{MPI_THREAD_FUNNELED}."))) (setenv "OMPI_MCA_plm_rsh_agent" (which "false")) ;; Allow oversubscription in case there are less physical cores available ;; in the build environment than the package wants while testing. - (setenv "OMPI_MCA_rmaps_base_oversubscribe" "yes") + (setenv "OMPI_MCA_rmaps_base_mapping_policy" "core:OVERSUBSCRIBE") #t)) (define-public python-mpi4py -- 2.20.1 From debbugs-submit-bounces@debbugs.gnu.org Fri Feb 08 23:31:39 2019 Received: (at 34388) by debbugs.gnu.org; 9 Feb 2019 04:31:39 +0000 Received: from localhost ([127.0.0.1]:40351 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1gsKIl-0002lt-5j for submit@debbugs.gnu.org; Fri, 08 Feb 2019 23:31:39 -0500 Received: from mail.onyx.syn-alias.com ([206.152.134.66]:41050 helo=smtp.centurylink.net) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1gsKIi-0002lf-Rd for 34388@debbugs.gnu.org; Fri, 08 Feb 2019 23:31:37 -0500 DKIM-Signature: v=1; a=rsa-sha1; d=centurylink.net; s=ctl201402; c=relaxed/simple; q=dns/txt; i=@centurylink.net; t=1549686691; h=From:Subject:Date:To:MIME-Version:Content-Type; bh=PbyBje2+nISK8Om0MvdwSp2EUYs=; b=EqS59xnEBR9L3UbNfTcATyZHASjbUczAq8QEXZ+tZvnPGrPjaDdIxtySfHcjup8i ypEj+UxXDn1UlwIA4yS8TZkzeUBXV5q1h42/vDFUZ/RRhF8vi4PRwkceZEJKEGds yvtRxogkFwHp9EfDOYzQl3T0uNYKyYL4cW9LULeS31d28JqpUVaD8msgVwhmnJMG qx/XtUfUCW08IjpubJuGGkRZ0vrDIW1O0ESogRZVuTmsSyNr0V0XYWeNULwg1MnK 77tSEx524RHFvKBqXkqx84DEa3zbxDlqL69t1TWUrn0MuEfjSi9q0WcBUm3sE87S eJgL/ySWdlvalM+GklcisA==; X_CMAE_Category: , , X-CNFS-Analysis: v=2.3 cv=YYXDGDZf c=1 sm=1 tr=0 a=QyxltsrUb1TgOUMZEPHifA==:117 a=QyxltsrUb1TgOUMZEPHifA==:17 a=KGjhK52YXX0A:10 a=CFTnQlWoA9kA:10 a=zSv6zi-ZgakA:10 a=1cBlP2KbAAAA:8 a=I_5RNyk1AAAA:8 a=inoG4m36AAAA:8 a=2Nwt_6ZQ_qChdD3QuREA:9 a=QEXdDO2ut3YA:10 a=MLzm2uDc4GcA:10 a=bxvNWX85wDYUPal0ELgA:9 a=sVIR2NZf5ZpJ0KoDd6yV:22 a=Eh9yxdLE6B1twWrs3SXz:22 a=_Qgj-RFg6mImvLaOgLPg:22 X-CM-Score: 0 X-Scanned-by: Cloudmark Authority Engine X-Authed-Username: ZXJpY2JhdmllckBjZW50dXJ5bGluay5uZXQ= Authentication-Results: smtp03.onyx.dfw.sync.lan smtp.user=ericbavier@centurylink.net; auth=pass (LOGIN) Received: from [97.116.114.155] ([97.116.114.155:43004] helo=localhost) by smtp.centurylink.net (envelope-from ) (ecelerity 3.6.25.56547 r(Core:3.6.25.0)) with ESMTPSA (cipher=AES256-GCM-SHA384) id DF/25-20266-2A75E5C5; Fri, 08 Feb 2019 23:31:31 -0500 Date: Fri, 8 Feb 2019 22:31:21 -0600 From: Eric Bavier To: Ricardo Wurmus Subject: Re: [bug#34388] [PATCH] gnu: openmpi: Upgrade to 4.0.0. Message-ID: <20190208223121.6666f3fd@centurylink.net> In-Reply-To: <87bm3mm8ru.fsf@elephly.net> References: <20190208150622.11377-1-ericbavier@centurylink.net> <87bm3mm8ru.fsf@elephly.net> X-Mailer: Claws Mail 3.17.3 (GTK+ 2.24.32; x86_64-unknown-linux-gnu) MIME-Version: 1.0 Content-Type: multipart/signed; micalg=pgp-sha512; boundary="Sig_/UYS0Kp+O6QW7fkYllZTH1EE"; protocol="application/pgp-signature" X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 34388 Cc: 34388@debbugs.gnu.org, Eric Bavier X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) --Sig_/UYS0Kp+O6QW7fkYllZTH1EE Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable On Fri, 08 Feb 2019 19:31:49 +0100 Ricardo Wurmus wrote: > Hi Eric, >=20 > ericbavier@centurylink.net writes: >=20 > > From: Eric Bavier > > > > * gnu/packages/linux.scm (psm)[arguments]: Add 'patch-sysmacros phase t= o fix > > "undefined reference to `minor'" errors while linking against > > libinfinipath.so. > > * gnu/packages/mpi.scm (openmpi): Upgrade to 4.0.0. > > [inputs]: Add libevent. > > [arguments]: Simplify configure-flags. Use system libevent. Adjust ro= mio > > version strings. > > (%openmpi-setup): Use OMPI_MCA_rmaps_base_mapping_policy for oversubscr= iption. =20 >=20 > Thank you, this looks good to me! Thanks for reviewing and providing the nice starting patch. >=20 > (After this has been pushed to the =E2=80=9Cmaster=E2=80=9D branch I woul= d like to add > support for Infiniband with a few minor changes.) Great, I thought I'd leave that to you. `~Eric --Sig_/UYS0Kp+O6QW7fkYllZTH1EE Content-Type: application/pgp-signature Content-Description: OpenPGP digital signature -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEoMXjUi7471xkzbfw/XPKxxnTJWYFAlxeV5oACgkQ/XPKxxnT JWZYyhAAn8TLjQIsZtng0nGTljcydrlXOITvQ6nDXc6Rkx6EtwxWYDJXhHvbBx3r CL5Zw8SS2kUvt2ZjJAN3AcINRxIUBPs4gkw9oTusIWc3HANYqfhNhFrJd8Be5GLE IXTfZu6tbulVXOtQgGJEij65UGe9StKqES+oZQFvNXM+YOGOVdr2/4LCWQh1dZR3 jgSE/BxRQal5chOfpL8JmftOIv42mENdpQACAy/UehwP4pm9GxbbA1EX7pbuuV5T JJFD0TOemxvzpvWig+WN1DcAgNCCSce+yTcQ0uG4/oaecGSCgQswAWiBYj3SA6cK HTWueH51oE2ugq4DZDuE03uxRCgmLJU7H4qcY0xx4JrYNFA+NI287JrP239Yhq/H QU4stMERNdEz1i4CqEHC66QnQiex0fDE8ROhhUmKjhdMS96evNv6CKqygw4M0auP A4ljL+SF2QuCGdvzw3TyDCHPf5WHQ0W7BWDvEpp079qcWaH6Si+kKQXh7mJUC48c G9xcYOI8TmbJtN2s2qeLlVCNU37l/G4Y5r+COHt80c5N/m4bMnkRam+KoAK2pW8s cXuQCXouWhRHpV11fIHCfXiIP5qtkn7Arz1rr+Us8Fy75NeT0w0eC40Zlm2jJKNQ 3AT4JPayov6uDGa2p6pOF5UshqVeqll+YamcHdtZjaEl8xZFdzc= =OzMS -----END PGP SIGNATURE----- --Sig_/UYS0Kp+O6QW7fkYllZTH1EE-- From debbugs-submit-bounces@debbugs.gnu.org Sat Feb 09 01:55:24 2019 Received: (at 34388-done) by debbugs.gnu.org; 9 Feb 2019 06:55:24 +0000 Received: from localhost ([127.0.0.1]:40416 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1gsMXs-0006Zo-Ax for submit@debbugs.gnu.org; Sat, 09 Feb 2019 01:55:24 -0500 Received: from mail.onyx.syn-alias.com ([206.152.134.66]:17974 helo=smtp.centurylink.net) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1gsMXq-0006ZZ-QA for 34388-done@debbugs.gnu.org; Sat, 09 Feb 2019 01:55:23 -0500 DKIM-Signature: v=1; a=rsa-sha1; d=centurylink.net; s=ctl201402; c=relaxed/simple; q=dns/txt; i=@centurylink.net; t=1549695316; h=From:Subject:Date:To:MIME-Version:Content-Type; bh=OOzN8dYPqrMCLPYFYdyTgAjXUow=; b=2QN/qHq9hHaZAWwAFsi78IQqz6BkChYFE7kjXCUvPzn198LrUHpgw0LkvRQ2isGF clKdXmKHD0cengPXLnfIjm1uu+8wqSOGo1ZWyAnLs9iyPrVs85NuUNQqvqup18MZ 33Fw49/zA/a+BROPl2WNSMcYXhblO5YxAetpg68own1YMeuYgNlLovmknekDASAT fU0Y+NxpVXsuhJaoPJ38PcVH7UaCWGVCDNtYvxctTDzQKbA1u5mACYSiS9d6pfAc /lOMSnzSSY29Y9ByHb/6NrYGMIiAOdKQV4JH94uCQB1jmZzQi1vB+ExlrvYQlJmj cFztDstNBVTZzKu8MjFi3Q==; X_CMAE_Category: , , X-CNFS-Analysis: v=2.3 cv=PIBxBsiC c=1 sm=1 tr=0 a=BfVlFhPyd91PDfmi2mD6hA==:117 a=BfVlFhPyd91PDfmi2mD6hA==:17 a=KGjhK52YXX0A:10 a=CFTnQlWoA9kA:10 a=zSv6zi-ZgakA:10 a=I_5RNyk1AAAA:8 a=1cBlP2KbAAAA:8 a=inoG4m36AAAA:8 a=JluyjpLR0WPBzl6PHToA:9 a=CjuIK1q_8ugA:10 a=MLzm2uDc4GcA:10 a=JVYJkjJvbnT4e2V_pFsA:9 a=Eh9yxdLE6B1twWrs3SXz:22 a=sVIR2NZf5ZpJ0KoDd6yV:22 a=_Qgj-RFg6mImvLaOgLPg:22 X-CM-Score: 0 X-Scanned-by: Cloudmark Authority Engine X-Authed-Username: ZXJpY2JhdmllckBjZW50dXJ5bGluay5uZXQ= Authentication-Results: smtp01.onyx.dfw.sync.lan smtp.user=ericbavier@centurylink.net; auth=pass (LOGIN) Received: from [97.116.106.8] ([97.116.106.8:44420] helo=localhost) by smtp.centurylink.net (envelope-from ) (ecelerity 3.6.25.56547 r(Core:3.6.25.0)) with ESMTPSA (cipher=AES256-GCM-SHA384) id 77/EE-30226-4597E5C5; Sat, 09 Feb 2019 01:55:16 -0500 Date: Sat, 9 Feb 2019 00:55:15 -0600 From: Eric Bavier To: Ricardo Wurmus Subject: Re: [bug#34388] [PATCH] gnu: openmpi: Upgrade to 4.0.0. Message-ID: <20190209005515.2df9d39d@centurylink.net> In-Reply-To: <20190208223121.6666f3fd@centurylink.net> References: <20190208150622.11377-1-ericbavier@centurylink.net> <87bm3mm8ru.fsf@elephly.net> <20190208223121.6666f3fd@centurylink.net> X-Mailer: Claws Mail 3.17.3 (GTK+ 2.24.32; x86_64-unknown-linux-gnu) MIME-Version: 1.0 Content-Type: multipart/signed; micalg=pgp-sha512; boundary="Sig_/akkQdQ8m195JfYSqrVXL9Sh"; protocol="application/pgp-signature" X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 34388-done Cc: 34388-done@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) --Sig_/akkQdQ8m195JfYSqrVXL9Sh Content-Type: text/plain; charset=US-ASCII Content-Transfer-Encoding: quoted-printable On Fri, 8 Feb 2019 22:31:21 -0600 Eric Bavier wrote: > On Fri, 08 Feb 2019 19:31:49 +0100 > Ricardo Wurmus wrote: >=20 > > Hi Eric, > >=20 > > ericbavier@centurylink.net writes: > > =20 > > > From: Eric Bavier > > > > > > * gnu/packages/linux.scm (psm)[arguments]: Add 'patch-sysmacros phase= to fix > > > "undefined reference to `minor'" errors while linking against > > > libinfinipath.so. > > > * gnu/packages/mpi.scm (openmpi): Upgrade to 4.0.0. > > > [inputs]: Add libevent. > > > [arguments]: Simplify configure-flags. Use system libevent. Adjust = romio > > > version strings. > > > (%openmpi-setup): Use OMPI_MCA_rmaps_base_mapping_policy for oversubs= cription. =20 > >=20 > > Thank you, this looks good to me! =20 >=20 > Thanks for reviewing and providing the nice starting patch. Pushed to master in 41313acebf39e04c9ddd0857b8cd8b69991c88c3 `~Eric --Sig_/akkQdQ8m195JfYSqrVXL9Sh Content-Type: application/pgp-signature Content-Description: OpenPGP digital signature -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEoMXjUi7471xkzbfw/XPKxxnTJWYFAlxeeVMACgkQ/XPKxxnT JWaIOQ/+MHXIldhYO4n3c6RDsIVZUHyLo/+9RkAjVf0YCndvlp4wv3Og7UEhNQV1 4ywMY/MMkOld5nr43Kq2i3K8qcvsDkGEP9/k4tHGZ+Y1vxszCGAbPe62OD0UWTyU aI8CY1IPqZrVT9gZx68pWSvOPyUBHRYNQ6CJdmsIFL85OgHeoNqqNQMNiMADJ3x6 oyzh+vThTYBeiRnoB88brUTkt/OyTiM23pwO2XZSN+py4udeXwuzT6YxmMCGtaMe gTC8c4TV7bQKTdKuDdb7JUbireO5lbp4yNPzWMu3L3F5wrIMCLi12NIgkPzv3vqN +RX6C5pO9TmQ1Hwsv9wKEPecbxs/lWXIxWL/IKfXMWGbnonNoTlcwSD+v6w4mmYq 3giGIdr8DhoWUHYxGMOVoH46jGpL6qpL07yEeNdiSJU+8IHhZDw4hHD9HegoqfI2 HnXdUEkLTDYX88p/UYlp2Wx810B58GYdnBzegVrL0IhMuO6QwSrf7uxmEafsfaHy 3uSwdFHSdOdnj/H6mma7g6iwSn7BogeztxGpZTjwt7SvVa04SvJ3qv0akk39Jf9F wxpT/EgO8kiv+yI4rxh8kjLZrnM6yY9gQEfmrrnOHpQp+PhaIShQ1xBBJPfkxIRh 3ghTqEKe8xPnclw2scKpeelH4Z0bM187yuKYTVxRJNvN9S/qUV4= =gza7 -----END PGP SIGNATURE----- --Sig_/akkQdQ8m195JfYSqrVXL9Sh-- From debbugs-submit-bounces@debbugs.gnu.org Sat Feb 09 21:21:08 2019 Received: (at 34388) by debbugs.gnu.org; 10 Feb 2019 02:21:08 +0000 Received: from localhost ([127.0.0.1]:41658 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1gsek0-00071E-Ij for submit@debbugs.gnu.org; Sat, 09 Feb 2019 21:21:08 -0500 Received: from sender-of-o51.zoho.com ([135.84.80.216]:21131) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1gsejy-000716-KA for 34388@debbugs.gnu.org; Sat, 09 Feb 2019 21:21:07 -0500 ARC-Seal: i=1; a=rsa-sha256; t=1549650714; cv=none; d=zoho.com; s=zohoarc; b=NyLJUiZquDzd6aRfVlsr8ZqTYsluUO6Sopla2zFy/oVTsN20089zuKLXE1M2hukkod1cBe/YQhDX0MMAt/x11oVvo3NcnA2n0SOPpTl6lOXQyvkCt4Zk0e8DSXjAtczVvpPOqDZvEcRbP4Jbq6RTsf+E6T9Ns9sfXD2+vlHmgKQ= ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=zoho.com; s=zohoarc; t=1549650714; h=Content-Type:Content-Transfer-Encoding:Cc:Date:From:In-Reply-To:MIME-Version:Message-ID:References:Subject:To:ARC-Authentication-Results; bh=hz6+wZ4e1kSd2cdX4KnqpqjnZQs+tZNd9hPButkjDCU=; b=KSwz9KEGglNg+mUi35KWbdFBG9hyJM8/qE8a93gxH8u7biPnpZpaqoZkVhSsh80edC7ulFzjp2hjIRIGjMFfKoQaL+JDfvfZ+RxPZl7hPLsVE1AYENTEKYW5G+YBlvMygNFr5zmN8T9GeGumzo7h5RzhYn2jhtMZ4IPdSESnGF0= ARC-Authentication-Results: i=1; mx.zoho.com; dkim=pass header.i=elephly.net; spf=pass smtp.mailfrom=rekado@elephly.net; dmarc=pass header.from= header.from= DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; t=1549650714; s=zoho; d=elephly.net; i=rekado@elephly.net; h=References:From:To:Cc:Subject:In-reply-to:Date:Message-ID:MIME-Version:Content-Type:Content-Transfer-Encoding; l=726; bh=hz6+wZ4e1kSd2cdX4KnqpqjnZQs+tZNd9hPButkjDCU=; b=cRrFad//9hPnMi+22xAHiNd8wb3r4AEgjupN6B5BBi0lhgIrGcXBKmdAr4ILEoJq YY7C87xoBmcNKMM4qurU8rILG1o+SbEhu4cW5jXCyq+9iCGgm70hTHVdlOn8QCRay8F iC2KUBXTXF2wvfn7nDuXkzM2Y4L/+SaIAHZU7W/U= Received: from localhost (p3E9E9147.dip0.t-ipconnect.de [62.158.145.71]) by mx.zohomail.com with SMTPS id 1549650714212941.9395893867095; Fri, 8 Feb 2019 10:31:54 -0800 (PST) References: <20190208150622.11377-1-ericbavier@centurylink.net> User-agent: mu4e 1.0; emacs 26.1 From: Ricardo Wurmus To: ericbavier@centurylink.net Subject: Re: [bug#34388] [PATCH] gnu: openmpi: Upgrade to 4.0.0. In-reply-to: <20190208150622.11377-1-ericbavier@centurylink.net> X-URL: https://elephly.net X-PGP-Key: https://elephly.net/rekado.pubkey X-PGP-Fingerprint: BCA6 89B6 3655 3801 C3C6 2150 197A 5888 235F ACAC Date: Fri, 08 Feb 2019 19:31:49 +0100 Message-ID: <87bm3mm8ru.fsf@elephly.net> MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-ZohoMailClient: External X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 34388 Cc: 34388@debbugs.gnu.org, Eric Bavier X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Hi Eric, ericbavier@centurylink.net writes: > From: Eric Bavier > > * gnu/packages/linux.scm (psm)[arguments]: Add 'patch-sysmacros phase to = fix > "undefined reference to `minor'" errors while linking against > libinfinipath.so. > * gnu/packages/mpi.scm (openmpi): Upgrade to 4.0.0. > [inputs]: Add libevent. > [arguments]: Simplify configure-flags. Use system libevent. Adjust romio > version strings. > (%openmpi-setup): Use OMPI_MCA_rmaps_base_mapping_policy for oversubscrip= tion. Thank you, this looks good to me! (After this has been pushed to the =E2=80=9Cmaster=E2=80=9D branch I would = like to add support for Infiniband with a few minor changes.) -- Ricardo From unknown Fri Jun 20 19:49:15 2025 Received: (at fakecontrol) by fakecontrolmessage; To: internal_control@debbugs.gnu.org From: Debbugs Internal Request Subject: Internal Control Message-Id: bug archived. Date: Sun, 10 Mar 2019 11:24:05 +0000 User-Agent: Fakemail v42.6.9 # This is a fake control message. # # The action: # bug archived. thanks # This fakemail brought to you by your local debbugs # administrator