GNU bug report logs - #32984
[PATCH] gnu: Add filtlong.

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Package: guix-patches;

Reported by: pimi <madalinionel.patrascu <at> mdc-berlin.de>

Date: Mon, 8 Oct 2018 09:19:01 UTC

Severity: normal

Tags: patch

Done: ludo <at> gnu.org (Ludovic Courtès)

Bug is archived. No further changes may be made.

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Message #13 received at 32984 <at> debbugs.gnu.org (full text, mbox):

From: pimi <madalinionel.patrascu <at> mdc-berlin.de>
To: <32984 <at> debbugs.gnu.org>
Cc: pimi <madalinionel.patrascu <at> mdc-berlin.de>
Subject: [PATCH] gnu: filtlong: update path in aux script.
Date: Tue, 9 Oct 2018 18:22:39 +0200

* gnu/packages/bioinformatics.scm (filtlong)[extra scritps]: corrected
the loading path for the filtlong in the script read_info_histograms.sh.
---
 gnu/packages/bioinformatics.scm | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index ed713cd14..cb9ce4df0 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -14103,6 +14103,8 @@ absolute GSEA.")
              (lambda _
                (substitute* "scripts/read_info_histograms.sh"
                  (("awk") (which "gawk")))
+               (substitute* "scripts/read_info_histograms.sh"
+                (("/../") "/../../../"))
                #t)))))
       (inputs
        `(("gawk" ,gawk)                 ;for read_info_histograms.sh
-- 
2.17.1
This bug report was last modified 6 years and 258 days ago.

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