From unknown Sat Aug 16 21:01:31 2025 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable MIME-Version: 1.0 X-Mailer: MIME-tools 5.509 (Entity 5.509) Content-Type: text/plain; charset=utf-8 From: bug#32697 <32697@debbugs.gnu.org> To: bug#32697 <32697@debbugs.gnu.org> Subject: Status: Reply-To: bug#32697 <32697@debbugs.gnu.org> Date: Sun, 17 Aug 2025 04:01:31 +0000 reassign 32697 guix-patches submitter 32697 "MadalinIonel.Patrascu@mdc-berlin.de" severity 32697 normal owner 32697 Ricardo Wurmus thanks From debbugs-submit-bounces@debbugs.gnu.org Tue Sep 11 05:17:39 2018 Received: (at submit) by debbugs.gnu.org; 11 Sep 2018 09:17:39 +0000 Received: from localhost ([127.0.0.1]:36153 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fzenj-0007bD-6w for submit@debbugs.gnu.org; Tue, 11 Sep 2018 05:17:39 -0400 Received: from eggs.gnu.org ([208.118.235.92]:59410) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fzeni-0007b0-9E for submit@debbugs.gnu.org; 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charset="utf-8" Content-Transfer-Encoding: base64 MIME-Version: 1.0 X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.2.x-3.x [generic] X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.6.x X-Received-From: 2001:4830:134:3::11 X-Spam-Score: -3.0 (---) X-Debbugs-Envelope-To: submit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -4.0 (----) DQoNCg0KTcSDZMSDbGluIElvbmVsIFBhdHJhyJljdQ0KDQpTeXN0ZW0gQWRtaW5pc3RyYXRvcg0K QmlvaW5mb3JtYXRpY3MgUGxhdGZvcm0NClRoZSBCZXJsaW4gSW5zdGl0dXRlIGZvciBNZWRpY2Fs IFN5c3RlbXMgQmlvbG9neSAoQklNU0IpDQpNYXggRGVsYnLDvGNrIENlbnRlciAoTURDKQ0KUm9i ZXJ0LVLDtnNzbGUtU3RyYcOfZSAxMA0KSG91c2UgODcsIHJvb20gMS4xMA0KMTMxMjUgQmVybGlu LCBHZXJtYW55 From debbugs-submit-bounces@debbugs.gnu.org Tue Sep 11 08:29:07 2018 Received: (at 32697) by debbugs.gnu.org; 11 Sep 2018 12:29:07 +0000 Received: from localhost ([127.0.0.1]:36279 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fzhn1-00086D-8B for submit@debbugs.gnu.org; Tue, 11 Sep 2018 08:29:07 -0400 Received: from pegasus.bbbm.mdc-berlin.de ([141.80.25.20]:59138) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fzhmz-000865-Ej for 32697@debbugs.gnu.org; Tue, 11 Sep 2018 08:29:06 -0400 Received: from localhost (localhost [127.0.0.1]) by pegasus.bbbm.mdc-berlin.de (Postfix) with ESMTP id 6C2CBAB60D3 for <32697@debbugs.gnu.org>; Tue, 11 Sep 2018 14:29:04 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:mime-version:x-mailer:message-id:date :date:subject:subject:from:from:received:received:received; s= mdc; t=1536668939; x=1538483340; bh=ZluVZ4Lj7Wvc9fqkk0kFcFHFCy2k tmJGsr1VKyaF5rs=; b=pSeSOe64ahW4TLZtqA7148c8wmLw0scDqpRJNLTFXARN HXeEkqEXg7kX8T0zR7Hc05Fz1gn20Cy403QzggzF6w5T+aUgCAdiUhAI6wM3cCt5 e/3d8lU5TyeNVaRt4TxI5lJwrmNtCtK31afhzCzl8w9T+8jylvVK538SeFtBr8g= X-Virus-Scanned: amavisd-new at mdc-berlin.de Received: from pegasus.bbbm.mdc-berlin.de ([127.0.0.1]) by localhost (pegasus.bbbm.mdc-berlin.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id Dv9b7VN81ITe for <32697@debbugs.gnu.org>; Tue, 11 Sep 2018 14:28:59 +0200 (CEST) Received: from SW-IT-P-CAS1.mdc-berlin.net (puck.citx.mdc-berlin.de [141.80.36.101]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-SHA384 (256/256 bits)) (No client certificate requested) by pegasus.bbbm.mdc-berlin.de (Postfix) with ESMTPS for <32697@debbugs.gnu.org>; Tue, 11 Sep 2018 14:28:59 +0200 (CEST) Received: from biadmin-KVM.nat (141.80.113.106) by SW-IT-P-CAS1.mdc-berlin.net (141.80.113.53) with Microsoft SMTP Server (TLS) id 14.3.408.0; Tue, 11 Sep 2018 14:28:58 +0200 From: pimi To: <32697@debbugs.gnu.org> Subject: [PATCH 1/4] gnu: Add r-mhsmm. Date: Tue, 11 Sep 2018 14:28:44 +0200 Message-ID: <20180911122847.11246-1-madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.17.1 MIME-Version: 1.0 Content-Type: text/plain X-Originating-IP: [141.80.113.106] X-TM-AS-Product-Ver: SMEX-12.5.0.1300-8.5.1010-24086.007 X-TM-AS-Result: No-2.786100-8.000000-10 X-TMASE-MatchedRID: cGF0M9a/eEt7qToVEfwBPAPZZctd3P4B81hDEI6KFM0NmPMcsvd5FpAP 6Djd73MAbqZQduIGtoz4jONi+gTm6lEAXL0Ub1O9aK+MsTwM+1nYP/ttQgmUXYKwF4K/wIz99wE vJvmkUrZHT5Cd/kR8gShP8jIxCrwflwV2iaAfSWcURSScn+QSXt0H8LFZNFG7doMssNsUwYWmqo NWmxhOsPe5uBQBPO7t5UdQn+Pr3JC1SnnoVmeUjBU5kyL4oAiAnOaJaGG+DtnQULjS/yeMycWzl 7yUl0GPO9/9W5C/VphcKRK3DM/KmiQGdl1tQI7t0/5HQxvVB1U0+aGhUx8J2mlvyA1GNPX1 X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--2.786100-8.000000 X-TMASE-Version: SMEX-12.5.0.1300-8.5.1010-24086.007 X-Spam-Score: -5.0 (-----) X-Debbugs-Envelope-To: 32697 Cc: pimi X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -6.0 (------) gnu/packages/cran.scm (r-mhsmm): New variable. --- gnu/packages/cran.scm | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 35badf334..e9ea46e4a 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -5686,3 +5686,26 @@ biological data by Michael Whitlock and Dolph Schluter.") series.") ;; Any version of the GPL (license (list license:gpl2+ license:gpl3+)))) + +(define-public r-mhsmm + (package + (name "r-mhsmm") + (version "0.4.16") + (source + (origin + (method url-fetch) + (uri (cran-uri "mhsmm" version)) + (sha256 + (base32 "009dj0zkj1zry7jr9hf4cknb686z50a2l967if64xm0dvjmp7dgs")))) + (build-system r-build-system) + (propagated-inputs `(("r-mvtnorm" ,r-mvtnorm))) + (home-page "https://github.com/jaredo/mhsmm/") + (synopsis "Inference for hidden Markov and semi-Markov models") + (description + "The @code{r-mhsmm} package implements estimation and prediction methods for +hidden Markov and semi-Markov models for multiple observation sequences. Such +techniques are of interest when observed data is thought to be dependent on some +unobserved (or hidden) state. Also, this package is suitable for equidistant +time series data, with multivariate and/or missing data. Allows user defined +emission distributions.") + (license license:gpl2+))) -- 2.17.1 From debbugs-submit-bounces@debbugs.gnu.org Tue Sep 11 08:29:35 2018 Received: (at 32697) by debbugs.gnu.org; 11 Sep 2018 12:29:35 +0000 Received: from localhost ([127.0.0.1]:36282 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fzhnT-000871-HJ for submit@debbugs.gnu.org; Tue, 11 Sep 2018 08:29:35 -0400 Received: from pegasus.bbbm.mdc-berlin.de ([141.80.25.20]:59146) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fzhnR-00086o-Av for 32697@debbugs.gnu.org; Tue, 11 Sep 2018 08:29:33 -0400 Received: from localhost (localhost [127.0.0.1]) by pegasus.bbbm.mdc-berlin.de (Postfix) with ESMTP id C9B11AB60DB for <32697@debbugs.gnu.org>; Tue, 11 Sep 2018 14:29:32 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:mime-version:references:in-reply-to :x-mailer:message-id:date:date:subject:subject:from:from :received:received:received; s=mdc; t=1536668967; x=1538483368; bh=buQ2vxdHxYI4wSXDX7bVvaqCloDnmcdLC8iGGfVV0pw=; b=n/XRGDfS5x/g 5OMVkrBIGlCSbfy4q7YxHHAh2+rzADOkQonKT3cqzhbgUEs8PnAOaKzP++QBkhXs PhmnxfzpfDqHN5HvC64OfQaTt1AxLGxo39/4yz+bIKOUzONdhHK3ZfP/TY5GSje9 PwLbsInLw0rt6pzML72QWssARUMUrq4= X-Virus-Scanned: amavisd-new at mdc-berlin.de Received: from pegasus.bbbm.mdc-berlin.de ([127.0.0.1]) by localhost (pegasus.bbbm.mdc-berlin.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id dqYkD6PVIQJo for <32697@debbugs.gnu.org>; Tue, 11 Sep 2018 14:29:27 +0200 (CEST) Received: from SW-IT-P-CAS1.mdc-berlin.net (puck.citx.mdc-berlin.de [141.80.36.101]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-SHA384 (256/256 bits)) (No client certificate requested) by pegasus.bbbm.mdc-berlin.de (Postfix) with ESMTPS for <32697@debbugs.gnu.org>; Tue, 11 Sep 2018 14:29:27 +0200 (CEST) Received: from biadmin-KVM.nat (141.80.113.106) by SW-IT-P-CAS1.mdc-berlin.net (141.80.113.53) with Microsoft SMTP Server (TLS) id 14.3.408.0; Tue, 11 Sep 2018 14:29:26 +0200 From: pimi To: <32697@debbugs.gnu.org> Subject: [PATCH 2/4] gnu: Add r-nleqslv. Date: Tue, 11 Sep 2018 14:28:45 +0200 Message-ID: <20180911122847.11246-2-madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.17.1 In-Reply-To: <20180911122847.11246-1-madalinionel.patrascu@mdc-berlin.de> References: <20180911122847.11246-1-madalinionel.patrascu@mdc-berlin.de> MIME-Version: 1.0 Content-Type: text/plain X-Originating-IP: [141.80.113.106] X-TM-AS-Product-Ver: SMEX-12.5.0.1300-8.5.1010-24086.007 X-TM-AS-Result: No-3.267400-8.000000-10 X-TMASE-MatchedRID: WY68sLfT9697qToVEfwBPAPZZctd3P4BkKAa/khZ3iRZps+y1VXzqQF1 3YqpnONA0EdJ1p8GY2DsZX3M9mdWSo+eiI05y0fpe8FaKRfM2oNbAoaK+wS4jYX664W6jMPiQVl SEo8CA+K8aQJFJ6rQ71uOhGJuS77wF/w4LTrCmySDFOJB7l5fzH0tCKdnhB589yM15V5aWpj6C0 ePs7A07ba607moR85RPAcD6puY3J/gTyiBOm6z8vPiZ+lT6ETmJ9QBAWfF5QJWnp1Gab1DPviyV 1IFEEGQo5qMAovvucbB2pEUJSVtSrFvx/dlPXZth/iXdbS1V7u7j2rWxYQLt0cGnllPWffhN10+ 4fC3tMDFhXMjdQIJpg== X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--3.267400-8.000000 X-TMASE-Version: SMEX-12.5.0.1300-8.5.1010-24086.007 X-Spam-Score: -5.0 (-----) X-Debbugs-Envelope-To: 32697 Cc: pimi X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -6.0 (------) gnu/packages/cran.scm (r-nleqslv): New variable. --- gnu/packages/cran.scm | 22 ++++++++++++++++++++++ 1 file changed, 22 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index e9ea46e4a..f5b259d53 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -5709,3 +5709,25 @@ unobserved (or hidden) state. Also, this package is suitable for equidistant time series data, with multivariate and/or missing data. Allows user defined emission distributions.") (license license:gpl2+))) + +(define-public r-nleqslv + (package + (name "r-nleqslv") + (version "3.3.2") + (source + (origin + (method url-fetch) + (uri (cran-uri "nleqslv" version)) + (sha256 + (base32 "1v9znvncyigw9r25wx2ma0b7ib179b488dl0qsrhp5zrcz7mcjgm")))) + (build-system r-build-system) + (native-inputs `(("gfortran" ,gfortran))) + (home-page "https://cran.r-project.org/web/packages/nleqslv/") + (synopsis "Solve systems of nonlinear equations") + (description + "The @code{r-nleqslv} package solves a system of nonlinear equations using a +Broyden or a Newton method with a choice of global strategies such as line +search and trust region. There are options for using a numerical or user +supplied Jacobian, for specifying a banded numerical Jacobian and for allowing a +singular or ill-conditioned Jacobian.") + (license license:gpl2+))) -- 2.17.1 From debbugs-submit-bounces@debbugs.gnu.org Tue Sep 11 08:29:50 2018 Received: (at 32697) by debbugs.gnu.org; 11 Sep 2018 12:29:50 +0000 Received: from localhost ([127.0.0.1]:36286 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fzhnh-00087b-Q7 for submit@debbugs.gnu.org; Tue, 11 Sep 2018 08:29:50 -0400 Received: from sinope02.bbbm.mdc-berlin.de ([141.80.25.24]:34490) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fzhnf-00087M-D3 for 32697@debbugs.gnu.org; Tue, 11 Sep 2018 08:29:48 -0400 Received: from localhost (localhost [127.0.0.1]) by sinope02.bbbm.mdc-berlin.de (Postfix) with ESMTP id 80409130FA90 for <32697@debbugs.gnu.org>; Tue, 11 Sep 2018 14:29:46 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:mime-version:references:in-reply-to :x-mailer:message-id:date:date:subject:subject:from:from :received:received:received; s=mdc; t=1536668981; x=1538483382; bh=/Y5PmEtDgbQiBgS1zK7u/VsNz7A5wfXm+yZuMTnI+Qw=; b=BJkDGawZxmFA MBZCzUYGb8yyR7bCwAMu/oRrPbUTOhtSe1x3FUlXV9PLOUjxUw2btX1qnPxiwhHr SjHkzYby8YnkTTvZ+5HHtR+xBNaKu2wKr2jQNy486sj67NV0HbOOiGloWAkePz6P SjNypyNk4UPWQ2gQHvU+PgZ+0Ve6Vjs= X-Virus-Scanned: amavisd-new at mdc-berlin.de Received: from sinope02.bbbm.mdc-berlin.de ([127.0.0.1]) by localhost (sinope02.bbbm.mdc-berlin.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 5foC0z3Oax5s for <32697@debbugs.gnu.org>; Tue, 11 Sep 2018 14:29:41 +0200 (CEST) Received: from SW-IT-P-CAS1.mdc-berlin.net (puck.citx.mdc-berlin.de [141.80.36.101]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-SHA384 (256/256 bits)) (No client certificate requested) by sinope02.bbbm.mdc-berlin.de (Postfix) with ESMTPS for <32697@debbugs.gnu.org>; Tue, 11 Sep 2018 14:29:41 +0200 (CEST) Received: from biadmin-KVM.nat (141.80.113.106) by SW-IT-P-CAS1.mdc-berlin.net (141.80.113.53) with Microsoft SMTP Server (TLS) id 14.3.408.0; Tue, 11 Sep 2018 14:29:40 +0200 From: pimi To: <32697@debbugs.gnu.org> Subject: [PATCH 3/4] gnu: Add r-physicalactivity. Date: Tue, 11 Sep 2018 14:28:46 +0200 Message-ID: <20180911122847.11246-3-madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.17.1 In-Reply-To: <20180911122847.11246-1-madalinionel.patrascu@mdc-berlin.de> References: <20180911122847.11246-1-madalinionel.patrascu@mdc-berlin.de> MIME-Version: 1.0 Content-Type: text/plain X-Originating-IP: [141.80.113.106] X-TM-AS-Product-Ver: SMEX-12.5.0.1300-8.5.1010-24086.007 X-TM-AS-Result: No-5.788500-8.000000-10 X-TMASE-MatchedRID: d+BGjaEADBV7qToVEfwBPAPZZctd3P4BVYV8j2OAQmVVJ67sl+rgYTC0 pJIQUiJOshqSxEuqoJhXBg15NRPRwUtzS/aGUmtz8pRHzcG+oi3eowaCYuJ2SxHfiujuTbedrDe MpdWNbo0aWhqJ9mvxZLpZ41mYBKZlXV8zTKunnsn1LPNpMHAZUDGZtPrBBPZr+Qd0AwHssSSchg TlkNhbS5bLJew18Q+PT3owrQ/hH21JI5ZUl647UBRFJJyf5BJe3QfwsVk0UbvdirxFVpmK9eVtS vcsPw6Y/4VB392gfOpVp6CDSfb9vt2Y75fLRkaKbWPawtsIR84= X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--5.788500-8.000000 X-TMASE-Version: SMEX-12.5.0.1300-8.5.1010-24086.007 X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 32697 Cc: pimi X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) gnu/packages/cran.scm (r-physicalactivity): New variable. --- gnu/packages/cran.scm | 33 +++++++++++++++++++++++++++++++++ 1 file changed, 33 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index f5b259d53..df320c229 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -5731,3 +5731,36 @@ search and trust region. There are options for using a numerical or user supplied Jacobian, for specifying a banded numerical Jacobian and for allowing a singular or ill-conditioned Jacobian.") (license license:gpl2+))) + +(define-public r-physicalactivity + (package + (name "r-physicalactivity") + (version "0.2-2") + (source + (origin + (method url-fetch) + (uri (cran-uri "PhysicalActivity" version)) + (sha256 + (base32 "14z6plgwyr46vs9m997rvlz8sdglfs9g087an8668zqkzzs2w4ln")))) + (properties + `((upstream-name . "PhysicalActivity"))) + (build-system r-build-system) + (home-page "https://cran.r-project.org/web/packages/PhysicalActivity/") + (synopsis "Procesing accelerometer data for physical activity measurement") + (description + "This @code{r-physicalactivity} package provides a function @code{wearingMarking} +for classification of monitor wear and nonwear time intervals in accelerometer +data collected to assess physical activity. The package also contains functions +for making plots of accelerometer data and obtaining the summary of various +information including daily monitor wear time and the mean monitor wear time +during valid days. The revised package version 0.2-1 improved the functions +regarding speed, robustness and add better support for time zones and daylight +saving. In addition, several functions were added: +@enumerate +@item the @code{markDelivery} can classify days for ActiGraph delivery by mail; +@item the @code{markPAI} can categorize physical activity intensity level based +on user-defined cut-points of accelerometer counts. +@end enumerate + It also supports importing ActiGraph (AGD) files with @code{readActigraph} and +@code{queryActigraph} functions.") + (license license:gpl3+))) -- 2.17.1 From debbugs-submit-bounces@debbugs.gnu.org Tue Sep 11 08:29:52 2018 Received: (at 32697) by debbugs.gnu.org; 11 Sep 2018 12:29:52 +0000 Received: from localhost ([127.0.0.1]:36288 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fzhnk-00087k-3h for submit@debbugs.gnu.org; Tue, 11 Sep 2018 08:29:52 -0400 Received: from venus.bbbm.mdc-berlin.de ([141.80.25.30]:44288) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fzhng-00087O-FO for 32697@debbugs.gnu.org; Tue, 11 Sep 2018 08:29:48 -0400 Received: from localhost (localhost [127.0.0.1]) by venus.bbbm.mdc-berlin.de (Postfix) with ESMTP id 9ACEA38085A for <32697@debbugs.gnu.org>; Tue, 11 Sep 2018 14:29:47 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:mime-version:references:in-reply-to :x-mailer:message-id:date:date:subject:subject:from:from :received:received:received; s=mdc; t=1536668987; x=1538483388; bh=rTTM5kefnq8AJX/30gBo2YeQUNhd3kI8H3IjFQM5SoA=; b=dwcDx5l5N4CP 9SR5WjvCSatuwqgFwOp71jFNRDPRHwOe389oZZ+rryFxhvXIHfXD3nT4C4GIwG1c 2T+dMpvugb2JWYtPda9Ne4RQv4O3OD6CUIxjeU45g+ys63ABMJOxWInpT3DgFYum SgmM8LlQnaBcUkRoH3ydz/1DXYwjAXg= X-Virus-Scanned: amavisd-new at mdc-berlin.de Received: from venus.bbbm.mdc-berlin.de ([127.0.0.1]) by localhost (venus.bbbm.mdc-berlin.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id KXtN8n5thfV2 for <32697@debbugs.gnu.org>; Tue, 11 Sep 2018 14:29:47 +0200 (CEST) Received: from SW-IT-P-CAS1.mdc-berlin.net (puck.citx.mdc-berlin.de [141.80.36.101]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-SHA384 (256/256 bits)) (No client certificate requested) by venus.bbbm.mdc-berlin.de (Postfix) with ESMTPS for <32697@debbugs.gnu.org>; Tue, 11 Sep 2018 14:29:47 +0200 (CEST) Received: from biadmin-KVM.nat (141.80.113.106) by SW-IT-P-CAS1.mdc-berlin.net (141.80.113.53) with Microsoft SMTP Server (TLS) id 14.3.408.0; Tue, 11 Sep 2018 14:29:46 +0200 From: pimi To: <32697@debbugs.gnu.org> Subject: [PATCH 4/4] gnu: Add r-acc. Date: Tue, 11 Sep 2018 14:28:47 +0200 Message-ID: <20180911122847.11246-4-madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.17.1 In-Reply-To: <20180911122847.11246-1-madalinionel.patrascu@mdc-berlin.de> References: <20180911122847.11246-1-madalinionel.patrascu@mdc-berlin.de> MIME-Version: 1.0 Content-Type: text/plain X-Originating-IP: [141.80.113.106] X-TM-AS-Product-Ver: SMEX-12.5.0.1300-8.5.1010-24086.007 X-TM-AS-Result: No-3.049600-8.000000-10 X-TMASE-MatchedRID: zoFxOq+IDXN7qToVEfwBPAPZZctd3P4BkKAa/khZ3iRZps+y1VXzqXDY qEpIIA85roXw7KN6eRG7/LlTYfsWi+o3TaQdFshVnVTWWiNp+v/Sv+oK79xjndzOQo7mTgA+9NL Xhwwkbuzi8zVgXoAltsIJ+4gwXrEtwrbXMGDYqV8X9rpBZuBDbVKc/a4Q5bGWSlBppweSaY2aZV Ap91Yll5xYN3e2dphN4XdHrgue8m5dlGYYSjK/m6c2Ol+dV8rYB2qMYEs4+8TUaerkcCaxBnMlK jd7kJW0P2nrhpzTnX4SFeEaqul3aIOFrOPMaJ4V X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--3.049600-8.000000 X-TMASE-Version: SMEX-12.5.0.1300-8.5.1010-24086.007 X-Spam-Score: -5.0 (-----) X-Debbugs-Envelope-To: 32697 Cc: pimi X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -6.0 (------) gnu/packages/cran.scm (r-acc): New variable. --- gnu/packages/cran.scm | 33 +++++++++++++++++++++++++++++++++ 1 file changed, 33 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index df320c229..7621b3bb6 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -5764,3 +5764,36 @@ on user-defined cut-points of accelerometer counts. It also supports importing ActiGraph (AGD) files with @code{readActigraph} and @code{queryActigraph} functions.") (license license:gpl3+))) + +(define-public r-acc + (package + (name "r-acc") + (version "1.3.3") + (source + (origin + (method url-fetch) + (uri (cran-uri "acc" version)) + (sha256 + (base32 "1ii2vm47djxbixa75h690q1s2f9m9x6i8nkygik93j6dayr6kr1m")))) + (build-system r-build-system) + (propagated-inputs + `(("r-circlize" ,r-circlize) + ("r-dbi" ,r-dbi) + ("r-ggplot2" ,r-ggplot2) + ("r-iterators" ,r-iterators) + ("r-mhsmm" ,r-mhsmm) + ("r-nleqslv" ,r-nleqslv) + ("r-physicalactivity" ,r-physicalactivity) + ("r-plyr" ,r-plyr) + ("r-r-utils" ,r-r-utils) + ("r-rcpp" ,r-rcpp) + ("r-rcpparmadillo" ,r-rcpparmadillo) + ("r-rsqlite" ,r-rsqlite) + ("r-zoo" ,r-zoo))) + (home-page "https://cran.r-project.org/web/packages/acc/") + (synopsis "Exploring accelerometer data") + (description + "This package processes accelerometer data from uni-axial and tri-axial devices +and generates data summaries. Also, includes functions to plot, analyze, and +simulate accelerometer data.") + (license license:gpl2+))) -- 2.17.1 From debbugs-submit-bounces@debbugs.gnu.org Thu Sep 13 13:01:39 2018 Received: (at control) by debbugs.gnu.org; 13 Sep 2018 17:01:39 +0000 Received: from localhost ([127.0.0.1]:39490 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1g0Uzr-0002sy-1l for submit@debbugs.gnu.org; Thu, 13 Sep 2018 13:01:39 -0400 Received: from sender-of-o51.zoho.com ([135.84.80.216]:21116) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1g0Uzo-0002sp-Sc for control@debbugs.gnu.org; Thu, 13 Sep 2018 13:01:37 -0400 ARC-Seal: i=1; a=rsa-sha256; t=1536858096; cv=none; d=zoho.com; s=zohoarc; b=cy/XX8agR4JZLvEbfqB3sU+6RNtgc1nDMNReMftW/nnwfK78GE7Ot5gbfDE9RH1VEcf5kgdJh1eOn2bZNN9GYl904QCd2pzjynaFD6rb3p7PCoEpSe5i7iF0Lu5Zu2AE36SDXNC6hix1q3a1Rro+jsj2cgiVeOWd7fFT8a7IuDE= ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=zoho.com; s=zohoarc; t=1536858096; h=Date:From:Message-ID:Subject:To:ARC-Authentication-Results; bh=WDi4cIDVNYagL9tjmw4pQoc4B0Ifzwwvd0wAZtRCQ8c=; b=aBwFwdfJ40FKl4o1XcXYQzAPI5M7C3k4oL+PeUZhhCP6uVX+qNu6m32kmAFGdzVPaKa1/R9qa/oEobz+m6OE8mNAQzOzPsSYhL3/QAhxB7VkLbc7IgPTVlWhltg8USeCklBvBVMLhVA5fVWQKKYFjTBXdTkNM2xUkXMKPEdv/ZQ= ARC-Authentication-Results: i=1; mx.zoho.com; dkim=pass header.i=elephly.net; spf=pass smtp.mailfrom=rekado@elephly.net; dmarc=pass header.from= header.from= DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; t=1536858096; s=zoho; d=elephly.net; i=rekado@elephly.net; h=Date:To:From:Message-ID:Subject; l=15; bh=WDi4cIDVNYagL9tjmw4pQoc4B0Ifzwwvd0wAZtRCQ8c=; b=TZDnZ9zTxJT3LfRBqvDKNT7xnKgiruY92YkO5/YXhVHcolVHZRFFKqzmV8vsxjjI lB+XKrbx1xhpeaM3DUR8SJ8tovuT+T42fkTpKAOHj0xjJ/ON6NXwZwqDISGkFqmaXg8 TVkjzNPIF/r6DPlfYDf2XfmF/fqZFqYiMjupcmDI= Received: from localhost (port-92-200-33-76.dynamic.qsc.de [92.200.33.76]) by mx.zohomail.com with SMTPS id 1536858095396263.0012549983477; Thu, 13 Sep 2018 10:01:35 -0700 (PDT) Date: Thu, 13 Sep 2018 19:01:32 +0200 To: control@debbugs.gnu.org From: Ricardo Wurmus Message-ID: <165d3e17f26.1137380e1906097614.2282488940638546416@zoho.com> Subject: control message for bug #32697 X-ZohoMailClient: External X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: control X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) owner 32697 ! From debbugs-submit-bounces@debbugs.gnu.org Mon Oct 01 09:09:31 2018 Received: (at 32697-done) by debbugs.gnu.org; 1 Oct 2018 13:09:31 +0000 Received: from localhost ([127.0.0.1]:60866 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1g6xx3-0001MT-Ux for submit@debbugs.gnu.org; Mon, 01 Oct 2018 09:09:31 -0400 Received: from out3-smtp.messagingengine.com ([66.111.4.27]:59865) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1g6xx1-0001MJ-IB for 32697-done@debbugs.gnu.org; Mon, 01 Oct 2018 09:09:28 -0400 Received: from compute4.internal (compute4.nyi.internal [10.202.2.44]) by mailout.nyi.internal (Postfix) with ESMTP id 444EA21F0C; Mon, 1 Oct 2018 09:09:27 -0400 (EDT) Received: from mailfrontend2 ([10.202.2.163]) by compute4.internal (MEProxy); Mon, 01 Oct 2018 09:09:27 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=famulari.name; h=cc:content-type:date:from:in-reply-to:message-id:mime-version :references:subject:to:x-me-sender:x-me-sender:x-sasl-enc; s= mesmtp; bh=klC5e3YwJHK2D+K2vqhbGIM4NbDV8oZDfiNtgaVTdZk=; b=RMUsl CslXiHXCY7XdiVSkaIRg+CY8NU5aJv+PvXSfDiDbr0iBILt2+CAxvwx5Vnx1HFIK BVn1SGtdnKe9XENpM3lVlD992pSziWRgCXmwdmhT6CD0Rd5HaZt18hZ1WMw8xENo BwVhOMZXxDg5gVD7NFx5+fUBfrArpcCh3nqmoQ= DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d= messagingengine.com; h=cc:content-type:date:from:in-reply-to :message-id:mime-version:references:subject:to:x-me-sender :x-me-sender:x-sasl-enc; s=fm3; bh=klC5e3YwJHK2D+K2vqhbGIM4NbDV8 oZDfiNtgaVTdZk=; b=Sd/ZjzU99VEtnKsJo+bVIiBDZrVGNDCF6vQyaMT9+NjAL BXSdoq43NzL3mNyqmuSScHQmHrlDd6GxC9Aq3U8foABCa8yDDNYekdSi6VWM2pTL FGh+517A2z+HgeDPAHR8F1dCnEej5RcQoRjaiX45aEYSicNbGql84xRPsQVERyge 6hdrHIB+oOJ4T6m2i7BWrwStMzPF3TUtp+5yRSAip+pzLGJFaeiW3adYdvfsiiY3 KvIoownzeBpMi0Nb8PErpFx0jwxccIs9WHA+AfUOmTAg6LbmBmNeA+4ouPAe3HdZ HuqlM4YvzjDYSRK5rAycuhhEH+XBfqwvbaY9d6+XA== X-ME-Sender: X-ME-Proxy: Received: from localhost (unknown [128.64.129.7]) by mail.messagingengine.com (Postfix) with ESMTPA id 819A8102D3; Mon, 1 Oct 2018 09:09:25 -0400 (EDT) Date: Mon, 1 Oct 2018 09:09:03 -0400 From: Leo Famulari To: pimi Subject: Re: [bug#32697] [PATCH 1/4] gnu: Add r-mhsmm. Message-ID: <20181001130903.GA10828@jasmine.lan> References: <918DDFCAA65E9447BD6F28DB666521DA9934F1@DAGONE.mdc-berlin.net> <20180911122847.11246-1-madalinionel.patrascu@mdc-berlin.de> MIME-Version: 1.0 Content-Type: multipart/signed; micalg=pgp-sha256; protocol="application/pgp-signature"; boundary="4Ckj6UjgE2iN1+kY" Content-Disposition: inline In-Reply-To: <20180911122847.11246-1-madalinionel.patrascu@mdc-berlin.de> User-Agent: Mutt/1.10.1 (2018-07-13) X-Spam-Score: -0.7 (/) X-Debbugs-Envelope-To: 32697-done Cc: 32697-done@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.7 (-) --4Ckj6UjgE2iN1+kY Content-Type: text/plain; charset=us-ascii Content-Disposition: inline On Tue, Sep 11, 2018 at 02:28:44PM +0200, pimi wrote: > gnu/packages/cran.scm (r-mhsmm): New variable. Thanks! I pushed this patch series as f95d45425152bda85950d2b8f9ead50bdce2e2cc --4Ckj6UjgE2iN1+kY Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- iQIzBAABCAAdFiEEsFFZSPHn08G5gDigJkb6MLrKfwgFAluyHG8ACgkQJkb6MLrK fwiw4w/+IAsneII9YIun38v5FErkaBIhKfWb4tShhy4ggf4HCZY58zBBFmf9DJvd MmgCRTO5cJmesJQNMFz2NpX3VUjZed4ynRnJ0s+8R+c0W5SRrYGi7RZfTFKYbQFz PmXsoojqzgrKQtQOTUbB4MoAq/iJ/LT/sT6t2hLIvqKO9YYep7rxz8i43V1KbzJh hAEdlQs/yzxaZArwJR1p2e3WRgI+webRY4Ac5RcXuaVIxT3U+IjYoWcVLn86S4vv 1lXbzpuT5aA4fQcjO59MdlFP5VopJtl6g6/osqT6wQkvwKs34OTYdYtZklSkYs1c Fhd2MShwKQTDYMaDFBT2zPI2rHmsBbV4TIZ+IMiG+ZQlNtomobuYxB+xNdbR6uL6 XV8dUv34dneNAAmsTR6pMo3g/f/0dUm+cqvIV46hQzwxcBfWckyk+0O0p8FtrdLf 0d8RQaMo1z5ZW3OXkTJBvG8m/syLbpEYhXT8+cCnGK6m4DLOiOjPLfpgsVMM1RvH tqle9LatkOirYsjMJCv2lOiIhGj5UQg9SDhAv2321uHMlk8VLt0BqLyoLfi5L6KK +8jE9klL0GThU2an48oJBHwnz6eZ0HHhqjTxog1t2beRmDKLRok/EM4r1hA0cw4d jZtzmk+YvzJu0d6ni9UCj3tW6zdpDTEFiy+KXOZWGzVwyQFxFxc= =rZ92 -----END PGP SIGNATURE----- --4Ckj6UjgE2iN1+kY-- From unknown Sat Aug 16 21:01:31 2025 Received: (at fakecontrol) by fakecontrolmessage; To: internal_control@debbugs.gnu.org From: Debbugs Internal Request Subject: Internal Control Message-Id: bug archived. Date: Tue, 30 Oct 2018 11:24:05 +0000 User-Agent: Fakemail v42.6.9 # This is a fake control message. # # The action: # bug archived. thanks # This fakemail brought to you by your local debbugs # administrator