From unknown Sat Sep 13 09:20:26 2025 X-Loop: help-debbugs@gnu.org Subject: [bug#32621] [PATCH] gnu: Add r-abe. Resent-From: pimi Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Mon, 03 Sep 2018 12:30:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 32621 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 32621@debbugs.gnu.org Cc: pimi X-Debbugs-Original-To: Received: via spool by submit@debbugs.gnu.org id=B.15359777653846 (code B ref -1); Mon, 03 Sep 2018 12:30:02 +0000 Received: (at submit) by debbugs.gnu.org; 3 Sep 2018 12:29:25 +0000 Received: from localhost ([127.0.0.1]:43695 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fwnyu-0000zx-MR for submit@debbugs.gnu.org; Mon, 03 Sep 2018 08:29:24 -0400 Received: from eggs.gnu.org ([208.118.235.92]:41133) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fwnyt-0000zl-TC for submit@debbugs.gnu.org; Mon, 03 Sep 2018 08:29:24 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1fwnyn-0002LY-To for submit@debbugs.gnu.org; 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Mon, 3 Sep 2018 14:29:07 +0200 (CEST) Received: from biadmin-KVM.nat (141.80.113.106) by SW-IT-P-CAS2.mdc-berlin.net (141.80.113.54) with Microsoft SMTP Server (TLS) id 14.3.408.0; Mon, 3 Sep 2018 14:28:13 +0200 From: pimi Date: Mon, 3 Sep 2018 14:27:58 +0200 Message-ID: <20180903122758.15121-1-madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.17.1 MIME-Version: 1.0 Content-Type: text/plain X-Originating-IP: [141.80.113.106] X-TM-AS-Product-Ver: SMEX-12.5.0.1300-8.5.1010-24070.005 X-TM-AS-Result: No-1.556300-8.000000-10 X-TMASE-MatchedRID: WO6FSsaLhY17qToVEfwBPAPZZctd3P4BpfVcx39Kq+5mg6PIPIwLy2SS kZWPzKpabqZQduIGtowrTIIq3G50v7OiH52HEKQ6//bcUqeMDLEZKp0SZ4P+dQ2Y8xyy93kWLmL 4Gv7V2j1zprJ7k+e5v32uUR00yjWh25RSBSigW1B17gHAyAFr06cpYtR39Ex3dE0auG3MZh9ZDF cUBKCbE1j1nZxoWy/8McbeuoCmGSCJFkMbl4S6rqUzlWzC7vTf0w14HFJQjaMvIIDffuAMV8+cw CLpvDnEMjMFHuhs0pRWdcIfVFWKVMOcsNpsXAv0ngIgpj8eDcCbifj2/J/1cS8z+bJ2nm9UKrau Xd3MZDUal568aygjl0c58YQBBDZCKn77Xab3RRpcq4KmAPCUmrW8aj/oETLNwPSOvMPAYJOeBkQ CGw9yZSXnnkaB3QFhPa57zFtHXq7ieRkxgbyV+xvWZa4Q0Lk6pyaqDjQGQtuOKd4yXKlFURjrV2 fDtBTsftwZ3X11IV0= X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--1.556300-8.000000 X-TMASE-Version: SMEX-12.5.0.1300-8.5.1010-24070.005 X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.2.x-3.x [generic] X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.6.x X-Received-From: 2001:4830:134:3::11 X-Spam-Score: -5.0 (-----) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -6.0 (------) gnu/packages/cran.scm (r-abe): New variable. --- gnu/packages/cran.scm | 28 ++++++++++++++++++++++++++++ 1 file changed, 28 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 016d1b1e4..dde5fb317 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -4988,3 +4988,31 @@ maximum cycle number. The @code{r-abcoptim} implements the Artificial bee colony optimization algorithm @url{http://mf.erciyes.edu.tr/abc/pub/tr06_2005.pdf}. This version is a work-in-progress and is written in R code.") (license license:expat))) + +(define-public r-abe + (package + (name "r-abe") + (version "3.0.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "abe" version)) + (sha256 + (base32 + "1f19h3xzzmjhvwc1rrb8z0rai3ip03y4gdi2gg9bfr5sg2nfklk6")))) + (build-system r-build-system) + (home-page "https://cran.r-project.org/web/packages/abe/") + (synopsis "Augmented backward elimination") + (description + "Statistical models are simple mathematical rules derived from empirical data describing +the association between an outcome and several explanatory variables. In a +typical modeling situation statistical analysis often involves a large number of +potential explanatory variables and frequently only partial subject-matter +knowledge is available. Therefore, selecting the most suitable variables for a +model in an objective and practical manner is usually a non-trivial task. This +package performs augmented backward elimination and checks the stability of the +obtained model. Augmented backward elimination combines significance or +information based criteria with the change in estimate to either select the +optimal model for prediction purposes or to serve as a tool to obtain a +practically sound, highly interpretable model.") + (license license:gpl2+))) -- 2.17.1 From unknown Sat Sep 13 09:20:26 2025 MIME-Version: 1.0 X-Mailer: MIME-tools 5.505 (Entity 5.505) X-Loop: help-debbugs@gnu.org From: help-debbugs@gnu.org (GNU bug Tracking System) To: pimi Subject: bug#32621: closed ([PATCH] gnu: Add r-abe.) Message-ID: References: <87tvmtil9z.fsf@elephly.net> <20180903122758.15121-1-madalinionel.patrascu@mdc-berlin.de> X-Gnu-PR-Message: they-closed 32621 X-Gnu-PR-Package: guix-patches X-Gnu-PR-Keywords: patch Reply-To: 32621@debbugs.gnu.org Date: Thu, 13 Sep 2018 13:24:01 +0000 Content-Type: multipart/mixed; boundary="----------=_1536845041-12368-1" This is a multi-part message in MIME format... ------------=_1536845041-12368-1 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable Content-Type: text/plain; charset="utf-8" Your bug report #32621: [PATCH] gnu: Add r-abe. which was filed against the guix-patches package, has been closed. The explanation is attached below, along with your original report. If you require more details, please reply to 32621@debbugs.gnu.org. --=20 32621: http://debbugs.gnu.org/cgi/bugreport.cgi?bug=3D32621 GNU Bug Tracking System Contact help-debbugs@gnu.org with problems ------------=_1536845041-12368-1 Content-Type: message/rfc822 Content-Disposition: inline Content-Transfer-Encoding: 7bit Received: (at 32621-done) by debbugs.gnu.org; 13 Sep 2018 13:23:29 +0000 Received: from localhost ([127.0.0.1]:38842 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1g0Raj-0003Cl-ME for submit@debbugs.gnu.org; Thu, 13 Sep 2018 09:23:29 -0400 Received: from sender-of-o51.zoho.com ([135.84.80.216]:21094) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1g0Rah-0003Cc-DV for 32621-done@debbugs.gnu.org; Thu, 13 Sep 2018 09:23:27 -0400 ARC-Seal: i=1; a=rsa-sha256; t=1536845005; cv=none; d=zoho.com; s=zohoarc; b=mqKOnB2sv+XNb0E/BV/V06uzKGzYteEs0jSU/jLLRg1VBca7iMki0CLAeie0TrNBDTok3oyfb6ZidQZH4FnUCsS2fXu1kC1CxFl40PAByNhHXglG7+ZoKIxuBxtgFVnS1bB7wqrOITa65mQGWAvli6tPNHnukTOqchQznhiDEXw= ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=zoho.com; s=zohoarc; t=1536845005; h=Content-Type:Date:From:MIME-Version:Message-ID:Subject:To:ARC-Authentication-Results; bh=GRN5zr61tJmdMZLrVAp2VXWpzzkj5yU1VdCO/5gEcd8=; b=ZaJuXuQiKXL0qeAdkk18Zxvy4MJ3rrFX98kao+5uVUPDky1ZddkI9YAGAXGaC7SctP53SinO4K+NbJwWV934L+ozyvb5hzoCHa5ntksV8Qzhn2uWc0dfkxF1MkDN95fkHKuLsnNaJjPMeJ0id+DDtvo8QQlK/9QeqI5QGP+GP70= ARC-Authentication-Results: i=1; mx.zoho.com; dkim=pass header.i=elephly.net; spf=pass smtp.mailfrom=rekado@elephly.net; dmarc=pass header.from= header.from= DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; t=1536845005; s=zoho; d=elephly.net; i=rekado@elephly.net; h=From:To:Subject:Date:Message-ID:MIME-Version:Content-Type; l=168; bh=GRN5zr61tJmdMZLrVAp2VXWpzzkj5yU1VdCO/5gEcd8=; b=ZVtLe825iwW6CAIf/heLVygtQHuHaH0f+h23XIN0lZFIUcQ6bES+Po4vOaRMsL0+ 0ucD8jXYM+ClwsGyrvgvUWcfkXwCe811VzgDfY4tp7ikLLV+2rReqhkWw7NLgjdj08V gXeWIb7P+05ad/w+vWBrPkmV3FRG1dQWv5OB0aw0= Received: from localhost (141.80.247.166 [141.80.247.166]) by mx.zohomail.com with SMTPS id 1536845003291830.3874243068141; Thu, 13 Sep 2018 06:23:23 -0700 (PDT) User-agent: mu4e 1.0; emacs 26.1 From: Ricardo Wurmus To: 32621-done@debbugs.gnu.org Subject: [PATCH] gnu: Add r-abe. X-URL: https://elephly.net X-PGP-Key: https://elephly.net/rekado.pubkey X-PGP-Fingerprint: BCA6 89B6 3655 3801 C3C6 2150 197A 5888 235F ACAC Date: Thu, 13 Sep 2018 15:23:20 +0200 Message-ID: <87tvmtil9z.fsf@elephly.net> MIME-Version: 1.0 Content-Type: text/plain X-ZohoMailClient: External X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 32621-done X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Thanks for the patch! I found the description a little too long, so I shortened it and pushed the patch to the master branch with commit 3cadd3ce9. -- Ricardo ------------=_1536845041-12368-1 Content-Type: message/rfc822 Content-Disposition: inline Content-Transfer-Encoding: 7bit Received: (at submit) by debbugs.gnu.org; 3 Sep 2018 12:29:25 +0000 Received: from localhost ([127.0.0.1]:43695 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fwnyu-0000zx-MR for submit@debbugs.gnu.org; Mon, 03 Sep 2018 08:29:24 -0400 Received: from eggs.gnu.org ([208.118.235.92]:41133) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fwnyt-0000zl-TC for submit@debbugs.gnu.org; Mon, 03 Sep 2018 08:29:24 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1fwnyn-0002LY-To for submit@debbugs.gnu.org; Mon, 03 Sep 2018 08:29:18 -0400 X-Spam-Checker-Version: SpamAssassin 3.3.2 (2011-06-06) on eggs.gnu.org X-Spam-Level: X-Spam-Status: No, score=0.8 required=5.0 tests=BAYES_50,T_DKIM_INVALID autolearn=disabled version=3.3.2 Received: from lists.gnu.org ([2001:4830:134:3::11]:45155) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32) (Exim 4.71) (envelope-from ) id 1fwnyn-0002LS-Q3 for submit@debbugs.gnu.org; Mon, 03 Sep 2018 08:29:17 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:33878) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1fwnym-0008NX-Mb for guix-patches@gnu.org; Mon, 03 Sep 2018 08:29:17 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1fwnyi-0002IT-MH for guix-patches@gnu.org; Mon, 03 Sep 2018 08:29:16 -0400 Received: from venus.bbbm.mdc-berlin.de ([141.80.25.30]:52274) by eggs.gnu.org with esmtps (TLS1.0:DHE_RSA_AES_256_CBC_SHA1:32) (Exim 4.71) (envelope-from ) id 1fwnyi-0002Hi-Be for guix-patches@gnu.org; Mon, 03 Sep 2018 08:29:12 -0400 Received: from localhost (localhost [127.0.0.1]) by venus.bbbm.mdc-berlin.de (Postfix) with ESMTP id 063DB3808DD for ; Mon, 3 Sep 2018 14:29:11 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:mime-version:x-mailer:message-id:date :date:subject:subject:from:from:received:received:received; s= mdc; t=1535977749; x=1537792150; bh=kky5XI0Jh4NSs4jQwq6oy66BDBCw ziqszGCTBR78guk=; b=s34m0qIq/MKn5ePrzmEf5yvR209dJ3t6riFm69P5Gs1d 0jjOSdWNtPUcTw/+wGIhBioe5aH7MhOONHE91aWAzg74hkaqXa/yl6SlSvRUyVd7 6I3W+AIO+u+Su0gr8pdQAqc5/zw+XfRUNqDAGAa4QXi4y5CviKImC0rGTMmClCA= X-Virus-Scanned: amavisd-new at mdc-berlin.de Received: from venus.bbbm.mdc-berlin.de ([127.0.0.1]) by localhost (venus.bbbm.mdc-berlin.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id TdDFSXWxjJCT for ; Mon, 3 Sep 2018 14:29:09 +0200 (CEST) Received: from SW-IT-P-CAS2.mdc-berlin.net (puck.citx.mdc-berlin.de [141.80.36.101]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-SHA384 (256/256 bits)) (No client certificate requested) by venus.bbbm.mdc-berlin.de (Postfix) with ESMTPS for ; Mon, 3 Sep 2018 14:29:07 +0200 (CEST) Received: from biadmin-KVM.nat (141.80.113.106) by SW-IT-P-CAS2.mdc-berlin.net (141.80.113.54) with Microsoft SMTP Server (TLS) id 14.3.408.0; Mon, 3 Sep 2018 14:28:13 +0200 From: pimi To: Subject: [PATCH] gnu: Add r-abe. Date: Mon, 3 Sep 2018 14:27:58 +0200 Message-ID: <20180903122758.15121-1-madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.17.1 MIME-Version: 1.0 Content-Type: text/plain X-Originating-IP: [141.80.113.106] X-TM-AS-Product-Ver: SMEX-12.5.0.1300-8.5.1010-24070.005 X-TM-AS-Result: No-1.556300-8.000000-10 X-TMASE-MatchedRID: WO6FSsaLhY17qToVEfwBPAPZZctd3P4BpfVcx39Kq+5mg6PIPIwLy2SS kZWPzKpabqZQduIGtowrTIIq3G50v7OiH52HEKQ6//bcUqeMDLEZKp0SZ4P+dQ2Y8xyy93kWLmL 4Gv7V2j1zprJ7k+e5v32uUR00yjWh25RSBSigW1B17gHAyAFr06cpYtR39Ex3dE0auG3MZh9ZDF cUBKCbE1j1nZxoWy/8McbeuoCmGSCJFkMbl4S6rqUzlWzC7vTf0w14HFJQjaMvIIDffuAMV8+cw CLpvDnEMjMFHuhs0pRWdcIfVFWKVMOcsNpsXAv0ngIgpj8eDcCbifj2/J/1cS8z+bJ2nm9UKrau Xd3MZDUal568aygjl0c58YQBBDZCKn77Xab3RRpcq4KmAPCUmrW8aj/oETLNwPSOvMPAYJOeBkQ CGw9yZSXnnkaB3QFhPa57zFtHXq7ieRkxgbyV+xvWZa4Q0Lk6pyaqDjQGQtuOKd4yXKlFURjrV2 fDtBTsftwZ3X11IV0= X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--1.556300-8.000000 X-TMASE-Version: SMEX-12.5.0.1300-8.5.1010-24070.005 X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.2.x-3.x [generic] X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.6.x X-Received-From: 2001:4830:134:3::11 X-Spam-Score: -5.0 (-----) X-Debbugs-Envelope-To: submit Cc: pimi X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -6.0 (------) gnu/packages/cran.scm (r-abe): New variable. --- gnu/packages/cran.scm | 28 ++++++++++++++++++++++++++++ 1 file changed, 28 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 016d1b1e4..dde5fb317 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -4988,3 +4988,31 @@ maximum cycle number. The @code{r-abcoptim} implements the Artificial bee colony optimization algorithm @url{http://mf.erciyes.edu.tr/abc/pub/tr06_2005.pdf}. This version is a work-in-progress and is written in R code.") (license license:expat))) + +(define-public r-abe + (package + (name "r-abe") + (version "3.0.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "abe" version)) + (sha256 + (base32 + "1f19h3xzzmjhvwc1rrb8z0rai3ip03y4gdi2gg9bfr5sg2nfklk6")))) + (build-system r-build-system) + (home-page "https://cran.r-project.org/web/packages/abe/") + (synopsis "Augmented backward elimination") + (description + "Statistical models are simple mathematical rules derived from empirical data describing +the association between an outcome and several explanatory variables. In a +typical modeling situation statistical analysis often involves a large number of +potential explanatory variables and frequently only partial subject-matter +knowledge is available. Therefore, selecting the most suitable variables for a +model in an objective and practical manner is usually a non-trivial task. This +package performs augmented backward elimination and checks the stability of the +obtained model. Augmented backward elimination combines significance or +information based criteria with the change in estimate to either select the +optimal model for prediction purposes or to serve as a tool to obtain a +practically sound, highly interpretable model.") + (license license:gpl2+))) -- 2.17.1 ------------=_1536845041-12368-1--