GNU bug report logs - #29945
[PATCH 2/2] gnu: Add python2-scientific.

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: Leo Famulari <leo <at> famulari.name>
Cc: tracker <at> debbugs.gnu.org
Subject: bug#29945: closed ([PATCH 2/2] gnu: Add python2-scientific.)
Date: Thu, 04 Jan 2018 17:47:03 +0000

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Your message dated Thu, 4 Jan 2018 12:46:40 -0500
with message-id <20180104174640.GB7210 <at> jasmine.lan>
and subject line Re: [bug#29945] [PATCH 2/2] gnu: Add python2-scientific.
has caused the debbugs.gnu.org bug report #29945,
regarding [PATCH 2/2] gnu: Add python2-scientific.
to be marked as done.

(If you believe you have received this mail in error, please contact
help-debbugs <at> gnu.org.)


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29945: http://debbugs.gnu.org/cgi/bugreport.cgi?bug=29945
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From: Konrad Hinsen <konrad.hinsen <at> fastmail.net>
To: guix-patches <at> gnu.org 
Subject: [PATCH 2/2] gnu: Add python2-scientific.
Date: Tue, 2 Jan 2018 16:53:56 +0100

* gnu/packages/python.scm (python2-scientific): New public variable.
---
 gnu/packages/python.scm | 40 ++++++++++++++++++++++++++++++++++++++++
 1 file changed, 40 insertions(+)

diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index 0dff54a1b..875982645 100644
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -12209,3 +12209,43 @@ and has much more to offer than Pyro or RMI.  Pyro 3.x is no
 longer maintained.  New projects should use Pyro4 instead, which
 is the new Pyro version that is actively developed.")
     (license license:expat)))
+
+(define-public python2-scientific
+  (package
+    (name "python2-scientific")
+    (version "2.9.4")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append "https://bitbucket.org/khinsen/"
+                           "scientificpython/downloads/ScientificPython-"
+                           version ".tar.gz"))
+       (file-name (string-append "ScientificPython-" version ".tar.gz"))
+       (sha256
+        (base32
+         "0fc69zhlsn9d2jvbzyjl9ah53vj598h84nkq230c83ahfvgzx5y3"))))
+    (build-system python-build-system)
+    (inputs
+     `(("netcdf" ,netcdf)))
+    (propagated-inputs
+     `(("python-numpy" ,python2-numpy-1.8)
+       ("python-pyro", python2-pyro)))
+    (arguments
+     ;; ScientificPython is not compatible with Python 3
+     `(#:python ,python-2
+       #:tests? #f
+       #:phases
+       (modify-phases %standard-phases
+         (replace 'build
+           (lambda* (#:key inputs #:allow-other-keys)
+             (zero? (system* "python" "setup.py" "build"
+                             (string-append "--netcdf_prefix="
+                                            (assoc-ref inputs "netcdf")))))))))
+    (home-page "https://bitbucket.org/khinsen/scientificpython")
+    (synopsis "Python modules for scientific computing")
+    (description "ScientificPython is a collection of Python modules that are
+useful for scientific computing.  Most modules are rather general (Geometry,
+physical units, automatic derivatives, ...) whereas others are more
+domain-specific (e.g. netCDF and PDB support).  The library is currently
+not actively maintained and works only with Python 2 and NumPy < 1.9.")
+    (license license:cecill-c)))
-- 
2.14.3 (Apple Git-98)

[Message part 3 (message/rfc822, inline)]

From: Leo Famulari <leo <at> famulari.name>
To: Konrad Hinsen <konrad.hinsen <at> fastmail.net>
Cc: 29945-done <at> debbugs.gnu.org
Subject: Re: [bug#29945] [PATCH 2/2] gnu: Add python2-scientific.
Date: Thu, 4 Jan 2018 12:46:40 -0500

[Message part 4 (text/plain, inline)]

On Tue, Jan 02, 2018 at 04:53:56PM +0100, Konrad Hinsen wrote:
> * gnu/packages/python.scm (python2-scientific): New public variable.

Thanks! I added a comment about there being no tests and pushed as
49aebf9613e8590728fd8f8a6d6c2c84a3d0d92b

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