GNU bug report logs - #27666
[grep on GPFS filesystem] SEEK_HOLE problem

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Package: grep;

Reported by: Moyard John <John.Moyard <at> cnes.fr>

Date: Wed, 12 Jul 2017 11:58:02 UTC

Severity: normal

Done: Paul Eggert <eggert <at> cs.ucla.edu>

Bug is archived. No further changes may be made.

Full log


Message #8 received at 27666 <at> debbugs.gnu.org (full text, mbox):

From: Eric Blake <eblake <at> redhat.com>
To: Moyard John <John.Moyard <at> cnes.fr>, 27666 <at> debbugs.gnu.org
Subject: Re: bug#27666: [grep on GPFS filesystem] SEEK_HOLE problem
Date: Wed, 12 Jul 2017 09:10:50 -0500
[Message part 1 (text/plain, inline)]
On 07/12/2017 04:27 AM, Moyard John wrote:
> Hi,
> 
> I use GPFS file system and I have sometimes an issue using grep command.
> When issue occurs with the following message "Binary file <myfile> matches"
> But "<myfile>" is an ASCII one, not a binary file.
> The problem seems to deals with lseek(SEEK_HOLE) command and a file not completely flushed after close.

If lseek(SEEK_HOLE) returns a mid-file offset when the file is first
created, but not later after the file has been synced, then that is a
bug in the filesystem which should be reported to the appropriate
filesystem/kernel folks.  SEEK_HOLE is only allowed to return a mid-file
offset if reading the file at that point in time would read NUL bytes,
and NUL bytes are indeed binary data.

> It could take several seconds to save the entire file on the disk.

Does running 'sync' prior to grep solve the problem?

-- 
Eric Blake, Principal Software Engineer
Red Hat, Inc.           +1-919-301-3266
Virtualization:  qemu.org | libvirt.org

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This bug report was last modified 5 years and 194 days ago.

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