GNU bug report logs - #19708
Bowtie fails to build

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: Andreas Enge <andreas <at> enge.fr>
Subject: bug#19708: closed (Re: bug#19708: Bowtie fails to build)
Date: Fri, 30 Jan 2015 16:08:03 +0000

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Your bug report

#19708: Bowtie fails to build

which was filed against the guix package, has been closed.

The explanation is attached below, along with your original report.
If you require more details, please reply to 19708 <at> debbugs.gnu.org.

-- 
19708: http://debbugs.gnu.org/cgi/bugreport.cgi?bug=19708
GNU Bug Tracking System
Contact help-debbugs <at> gnu.org with problems

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From: Mark H Weaver <mhw <at> netris.org>
To: Ricardo Wurmus <ricardo.wurmus <at> mdc-berlin.de>
Cc: Andreas Enge <andreas <at> enge.fr>, 19708-done <at> debbugs.gnu.org
Subject: Re: bug#19708: Bowtie fails to build
Date: Fri, 30 Jan 2015 11:07:51 -0500

Fixed in 241e12219.  Thanks to Ricardo and Andreas for sorting this out!

     Mark

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From: Andreas Enge <andreas <at> enge.fr>
To: bug-guix <at> gnu.org
Subject: Bowtie fails to build
Date: Tue, 27 Jan 2015 22:47:27 +0100

Hello,

bowtie currently fails to build on all three architectures on hydra.

On i686, the error message is:
Makefile:146: *** bowtie2 compilation requires a 64-bit platform .  Stop.

Surprisingly, the same error message is shown on mip64el (!).
From its description, I do not expect users to run the program on mips,
so it might be the safest option to disable the build of these two
architectures.

On x86_64, the error message is
g++: error: unrecognized command line option '-stdlib=libstdc++'
See http://hydra.gnu.org/build/204787 .

Andreas

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