GNU bug report logs - #19708
Bowtie fails to build

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Package: guix;

Reported by: Andreas Enge <andreas <at> enge.fr>

Date: Tue, 27 Jan 2015 21:48:01 UTC

Severity: normal

Done: Mark H Weaver <mhw <at> netris.org>

Bug is archived. No further changes may be made.

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: Mark H Weaver <mhw <at> netris.org>
Cc: tracker <at> debbugs.gnu.org
Subject: bug#19708: closed (Bowtie fails to build)
Date: Fri, 30 Jan 2015 16:08:02 +0000

[Message part 1 (text/plain, inline)]
Your message dated Fri, 30 Jan 2015 11:07:51 -0500
with message-id <87d25wp7zc.fsf <at> netris.org>
and subject line Re: bug#19708: Bowtie fails to build
has caused the debbugs.gnu.org bug report #19708,
regarding Bowtie fails to build
to be marked as done.

(If you believe you have received this mail in error, please contact
help-debbugs <at> gnu.org.)


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[Message part 2 (message/rfc822, inline)]
From: Andreas Enge <andreas <at> enge.fr>
To: bug-guix <at> gnu.org
Subject: Bowtie fails to build
Date: Tue, 27 Jan 2015 22:47:27 +0100

Hello,

bowtie currently fails to build on all three architectures on hydra.

On i686, the error message is:
Makefile:146: *** bowtie2 compilation requires a 64-bit platform .  Stop.

Surprisingly, the same error message is shown on mip64el (!).
From its description, I do not expect users to run the program on mips,
so it might be the safest option to disable the build of these two
architectures.

On x86_64, the error message is
g++: error: unrecognized command line option '-stdlib=libstdc++'
See http://hydra.gnu.org/build/204787 .

Andreas




[Message part 3 (message/rfc822, inline)]
From: Mark H Weaver <mhw <at> netris.org>
To: Ricardo Wurmus <ricardo.wurmus <at> mdc-berlin.de>
Cc: Andreas Enge <andreas <at> enge.fr>, 19708-done <at> debbugs.gnu.org
Subject: Re: bug#19708: Bowtie fails to build
Date: Fri, 30 Jan 2015 11:07:51 -0500

Fixed in 241e12219.  Thanks to Ricardo and Andreas for sorting this out!

     Mark
This bug report was last modified 10 years and 174 days ago.

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