GNU bug report logs -
#18222
24.3.92; fork handlers in gmalloc.c can lead to deadlock
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Reported by: Ken Brown <kbrown <at> cornell.edu>
Date: Fri, 8 Aug 2014 13:11:01 UTC
Severity: normal
Found in version 24.3.92
Fixed in version 25.1
Done: Ken Brown <kbrown <at> cornell.edu>
Bug is archived. No further changes may be made.
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Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):
malloc_enable_thread() in gmalloc.c calls pthread_atfork to set up fork
handlers. There are a couple of problems with this, but the immediate
reason for this bug report is a problem on Cygwin that was reported in
the thread starting at
https://cygwin.com/ml/cygwin/2014-07/msg00387.html
and continuing at
https://cygwin.com/ml/cygwin/2014-08/msg00001.html.
The issue is that the 'prepare' fork handler locks the pthread_mutexes
prior to forking, and the ensuing processing of the fork command by the
Cygwin DLL leads to a call to malloc in the same thread, resulting in
deadlock. This is a long-standing problem, but it was masked until
recently by the fact that pthread_mutexes on Cygwin were ERRORCHECK
mutexes by default. As of Cygwin 1.7.31, pthread_mutexes are now NORMAL
mutexes by default, so the problem has shown up.
A simple short-term workaround would be to explicitly set the mutexes to
be ERRORCHECK or RECURSIVE mutexes on Cygwin, thereby restoring the
previous behavior. But this does not seem like the right long-term
solution, for the reasons explained here:
https://cygwin.com/ml/cygwin/2014-08/msg00161.html
https://cygwin.com/ml/cygwin/2014-08/msg00175.html
I know nothing about this other than what I learned from the two
messages above, so I would appreciate some guidance.
Ken
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(Sat, 09 Aug 2014 07:45:03 GMT)
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Message #8 received at 18222 <at> debbugs.gnu.org (full text, mbox):
>>>>> On Fri, 08 Aug 2014 09:09:31 -0400, Ken Brown <kbrown <at> cornell.edu> said:
> malloc_enable_thread() in gmalloc.c calls pthread_atfork to set up fork
> handlers. There are a couple of problems with this, but the immediate
> reason for this bug report is a problem on Cygwin that was reported in
> the thread starting at
> https://cygwin.com/ml/cygwin/2014-07/msg00387.html
> and continuing at
> https://cygwin.com/ml/cygwin/2014-08/msg00001.html.
> The issue is that the 'prepare' fork handler locks the pthread_mutexes
> prior to forking, and the ensuing processing of the fork command by the
> Cygwin DLL leads to a call to malloc in the same thread, resulting in
> deadlock. This is a long-standing problem, but it was masked until
> recently by the fact that pthread_mutexes on Cygwin were ERRORCHECK
> mutexes by default. As of Cygwin 1.7.31, pthread_mutexes are now NORMAL
> mutexes by default, so the problem has shown up.
> A simple short-term workaround would be to explicitly set the mutexes to
> be ERRORCHECK or RECURSIVE mutexes on Cygwin, thereby restoring the
> previous behavior. But this does not seem like the right long-term
> solution, for the reasons explained here:
> https://cygwin.com/ml/cygwin/2014-08/msg00161.html
> https://cygwin.com/ml/cygwin/2014-08/msg00175.html
> I know nothing about this other than what I learned from the two
> messages above, so I would appreciate some guidance.
Originally, gmalloc.c bundled with Emacs was not thread-safe, so I
added some mutex code as a short-term solution:
http://lists.gnu.org/archive/html/emacs-devel/2007-06/msg01782.html
Thread-safe malloc was required mainly for GLib (via GTK+, for
example), and atfork handers were necessary because the threads
internally used by GLib were not under our control.
All the platforms I'm currently working at use their system malloc
rather than Emacs's gmalloc.c, so I don't think I can be of much help
about this issue. If changing mutex attributes works well, then I
think that would be good enough for a workaround for upcoming 24.4
release. For a long term solution, it might be better to think about
a transition to Cygwin's malloc (you mentioned
malloc_set_state/malloc_get_state in (*), but they are used only when
DOUG_LEA_MALLOC is defined).
*: https://cygwin.com/ml/cygwin/2014-08/msg00167.html
YAMAMOTO Mitsuharu
mituharu <at> math.s.chiba-u.ac.jp
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Message #11 received at 18222 <at> debbugs.gnu.org (full text, mbox):
On 8/9/2014 3:44 AM, YAMAMOTO Mitsuharu wrote:
>>>>>> On Fri, 08 Aug 2014 09:09:31 -0400, Ken Brown <kbrown <at> cornell.edu> said:
>
>> malloc_enable_thread() in gmalloc.c calls pthread_atfork to set up fork
>> handlers. There are a couple of problems with this, but the immediate
>> reason for this bug report is a problem on Cygwin that was reported in
>> the thread starting at
>
>> https://cygwin.com/ml/cygwin/2014-07/msg00387.html
>
>> and continuing at
>
>> https://cygwin.com/ml/cygwin/2014-08/msg00001.html.
>
>> The issue is that the 'prepare' fork handler locks the pthread_mutexes
>> prior to forking, and the ensuing processing of the fork command by the
>> Cygwin DLL leads to a call to malloc in the same thread, resulting in
>> deadlock. This is a long-standing problem, but it was masked until
>> recently by the fact that pthread_mutexes on Cygwin were ERRORCHECK
>> mutexes by default. As of Cygwin 1.7.31, pthread_mutexes are now NORMAL
>> mutexes by default, so the problem has shown up.
>
>> A simple short-term workaround would be to explicitly set the mutexes to
>> be ERRORCHECK or RECURSIVE mutexes on Cygwin, thereby restoring the
>> previous behavior. But this does not seem like the right long-term
>> solution, for the reasons explained here:
>
>> https://cygwin.com/ml/cygwin/2014-08/msg00161.html
>> https://cygwin.com/ml/cygwin/2014-08/msg00175.html
>
>> I know nothing about this other than what I learned from the two
>> messages above, so I would appreciate some guidance.
>
> Originally, gmalloc.c bundled with Emacs was not thread-safe, so I
> added some mutex code as a short-term solution:
>
> http://lists.gnu.org/archive/html/emacs-devel/2007-06/msg01782.html
>
> Thread-safe malloc was required mainly for GLib (via GTK+, for
> example), and atfork handers were necessary because the threads
> internally used by GLib were not under our control.
>
> All the platforms I'm currently working at use their system malloc
> rather than Emacs's gmalloc.c, so I don't think I can be of much help
> about this issue. If changing mutex attributes works well, then I
> think that would be good enough for a workaround for upcoming 24.4
> release.
OK. For maximum safety, I should probably set the type of the mutexes
to ERRORCHECK, as they were in Cygwin 1.7.30, even though I think
RECURSIVE would work just as well.
> For a long term solution, it might be better to think about
> a transition to Cygwin's malloc
I'll try to do this, but it's not at all clear how, given the way emacs
is built on Cygwin. (See the comments at lines 309 and 1301 in gmalloc.c.)
> (you mentioned
> malloc_set_state/malloc_get_state in (*), but they are used only when
> DOUG_LEA_MALLOC is defined).
You're right, although there's something of a Catch 22 here. Cygwin's
malloc is in fact Doug Lea malloc, but the emacs configure test for
DOUG_LEA_MALLOC simply tests for malloc_set_state and malloc_get_state
(and a couple of hooks).
In any case, I think it would be much easier to switch to Cygwin's
malloc if it had malloc_set_state and malloc_get_state. I wonder how
hard it would be to add those.
Ken
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(Mon, 11 Aug 2014 02:17:02 GMT)
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Message #14 received at 18222 <at> debbugs.gnu.org (full text, mbox):
On 8/9/2014 3:24 PM, Ken Brown wrote:
> On 8/9/2014 3:44 AM, YAMAMOTO Mitsuharu wrote:
>>>>>>> On Fri, 08 Aug 2014 09:09:31 -0400, Ken Brown
>>>>>>> <kbrown <at> cornell.edu> said:
>>
>>> malloc_enable_thread() in gmalloc.c calls pthread_atfork to set up fork
>>> handlers. There are a couple of problems with this, but the immediate
>>> reason for this bug report is a problem on Cygwin that was reported in
>>> the thread starting at
>>
>>> https://cygwin.com/ml/cygwin/2014-07/msg00387.html
>>
>>> and continuing at
>>
>>> https://cygwin.com/ml/cygwin/2014-08/msg00001.html.
>>
>>> The issue is that the 'prepare' fork handler locks the pthread_mutexes
>>> prior to forking, and the ensuing processing of the fork command by the
>>> Cygwin DLL leads to a call to malloc in the same thread, resulting in
>>> deadlock. This is a long-standing problem, but it was masked until
>>> recently by the fact that pthread_mutexes on Cygwin were ERRORCHECK
>>> mutexes by default. As of Cygwin 1.7.31, pthread_mutexes are now NORMAL
>>> mutexes by default, so the problem has shown up.
>>
>>> A simple short-term workaround would be to explicitly set the mutexes to
>>> be ERRORCHECK or RECURSIVE mutexes on Cygwin, thereby restoring the
>>> previous behavior. But this does not seem like the right long-term
>>> solution, for the reasons explained here:
>>
>>> https://cygwin.com/ml/cygwin/2014-08/msg00161.html
>>> https://cygwin.com/ml/cygwin/2014-08/msg00175.html
>>
>>> I know nothing about this other than what I learned from the two
>>> messages above, so I would appreciate some guidance.
>>
>> Originally, gmalloc.c bundled with Emacs was not thread-safe, so I
>> added some mutex code as a short-term solution:
>>
>> http://lists.gnu.org/archive/html/emacs-devel/2007-06/msg01782.html
>>
>> Thread-safe malloc was required mainly for GLib (via GTK+, for
>> example), and atfork handers were necessary because the threads
>> internally used by GLib were not under our control.
>>
>> All the platforms I'm currently working at use their system malloc
>> rather than Emacs's gmalloc.c, so I don't think I can be of much help
>> about this issue. If changing mutex attributes works well, then I
>> think that would be good enough for a workaround for upcoming 24.4
>> release.
>
> OK. For maximum safety, I should probably set the type of the mutexes
> to ERRORCHECK, as they were in Cygwin 1.7.30, even though I think
> RECURSIVE would work just as well.
The patch below does this. Stefan, is it OK to install this in the emacs-24 branch?
Ken
=== modified file 'src/gmalloc.c'
--- src/gmalloc.c 2014-03-04 19:02:49 +0000
+++ src/gmalloc.c 2014-08-10 13:24:52 +0000
@@ -490,8 +490,18 @@
}
#ifdef USE_PTHREAD
+/* On Cygwin prior to 1.7.31, pthread_mutexes were ERRORCHECK mutexes
+ by default. When the default changed to NORMAL in Cygwin-1.7.31,
+ deadlocks occurred (bug#18222). As a temporary workaround, we
+ explicitly set the mutexes to be of ERRORCHECK type, restoring the
+ previous behavior. */
+#ifdef CYGWIN
+pthread_mutex_t _malloc_mutex = PTHREAD_ERRORCHECK_MUTEX_INITIALIZER_NP;
+pthread_mutex_t _aligned_blocks_mutex = PTHREAD_ERRORCHECK_MUTEX_INITIALIZER_NP;
+#else /* not CYGWIN */
pthread_mutex_t _malloc_mutex = PTHREAD_MUTEX_INITIALIZER;
pthread_mutex_t _aligned_blocks_mutex = PTHREAD_MUTEX_INITIALIZER;
+#endif /* not CYGWIN */
int _malloc_thread_enabled_p;
static void
@@ -526,14 +536,23 @@
initialized mutexes when they are used first. To avoid such a
situation, we initialize mutexes here while their use is
disabled in malloc etc. */
+#ifdef CYGWIN
+ /* Use ERRORCHECK mutexes; see comment above. */
+ pthread_mutexattr_t attr;
+ pthread_mutexattr_init (&attr);
+ pthread_mutexattr_settype (&attr, PTHREAD_MUTEX_ERRORCHECK);
+ pthread_mutex_init (&_malloc_mutex, &attr);
+ pthread_mutex_init (&_aligned_blocks_mutex, &attr);
+#else /* not CYGWIN */
pthread_mutex_init (&_malloc_mutex, NULL);
pthread_mutex_init (&_aligned_blocks_mutex, NULL);
+#endif /* not CYGWIN */
pthread_atfork (malloc_atfork_handler_prepare,
malloc_atfork_handler_parent,
malloc_atfork_handler_child);
_malloc_thread_enabled_p = 1;
}
-#endif
+#endif /* USE_PTHREAD */
static void
malloc_initialize_1 (void)
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Message #17 received at 18222 <at> debbugs.gnu.org (full text, mbox):
> The patch below does this. Stefan, is it OK to install this in the
> emacs-24 branch?
Yes, go ahead, thanks,
Stefan
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Message #20 received at 18222 <at> debbugs.gnu.org (full text, mbox):
On 8/11/2014 10:44 AM, Stefan Monnier wrote:
>> The patch below does this. Stefan, is it OK to install this in the
>> emacs-24 branch?
>
> Yes, go ahead, thanks,
Done, as bzr revno 117441. I'm leaving the bug open, since a better fix
is needed for the trunk.
Ken
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Message #23 received at 18222 <at> debbugs.gnu.org (full text, mbox):
[Message part 1 (text/plain, inline)]
On 8/11/2014 11:29 AM, Ken Brown wrote:
> I'm leaving the bug open, since a better fix
> is needed for the trunk.
I tried to implement Yamamoto Mitsuharu's suggestion of switching to
Cygwin's malloc. I don't see a reasonable way to avoid using gmalloc.c
before dumping, because I think that would require a major rewrite of
unexec, and even then I don't see how to do it. But it turns out to be
easy to make the dumped emacs use Cygwin's malloc, and this seems to
solve all the problems with gmalloc.c that I'm aware of (patch
attached). In particular, there's no need to worry about making malloc
thread-safe.
Most of what's needed for this is not Cygwin-specific, so I've tried to
write it in a general way on the off chance that it's useful for other
platforms that use gmalloc. I've defined a new macro HYBRID_MALLOC that
means "use gmalloc before dumping and the system malloc after dumping".
All the Cygwin-specific code occurs in the definitions of two macros,
DUMPED and ALLOCATED_BEFORE_DUMPING, in gmalloc.c.
The patch still needs a lot more testing, but I'd like to know if people
think my approach is reasonable. Comments and suggestions would be
appreciated. I would also appreciate it if people who build emacs on
Cygwin would test the patch.
Ken
[malloc.patch (text/plain, attachment)]
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(Sun, 24 Aug 2014 23:30:03 GMT)
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Message #26 received at 18222 <at> debbugs.gnu.org (full text, mbox):
>>>>> On Sat, 23 Aug 2014 12:00:08 -0400, Ken Brown <kbrown <at> cornell.edu> said:
> On 8/11/2014 11:29 AM, Ken Brown wrote:
>> I'm leaving the bug open, since a better fix is needed for the
>> trunk.
> I tried to implement Yamamoto Mitsuharu's suggestion of switching to
> Cygwin's malloc. I don't see a reasonable way to avoid using
> gmalloc.c before dumping, because I think that would require a major
> rewrite of unexec, and even then I don't see how to do it. But it
> turns out to be easy to make the dumped emacs use Cygwin's malloc,
> and this seems to solve all the problems with gmalloc.c that I'm
> aware of (patch attached). In particular, there's no need to worry
> about making malloc thread-safe.
> Most of what's needed for this is not Cygwin-specific, so I've tried
> to write it in a general way on the off chance that it's useful for
> other platforms that use gmalloc. I've defined a new macro
> HYBRID_MALLOC that means "use gmalloc before dumping and the system
> malloc after dumping". All the Cygwin-specific code occurs in the
> definitions of two macros, DUMPED and ALLOCATED_BEFORE_DUMPING, in
> gmalloc.c.
> The patch still needs a lot more testing, but I'd like to know if
> people think my approach is reasonable. Comments and suggestions
> would be appreciated. I would also appreciate it if people who
> build emacs on Cygwin would test the patch.
I think it's worth trying also on other platforms that use gmalloc.
IIRC, the main reason why *BSDs are using gmalloc is their system
mallocs are not compatible with unexec.
One drawback of this approach is it makes it impossible to dump from a
dumped executable. But this limitation already exists on Darwin (OS
X), and would not be a big practical issue.
YAMAMOTO Mitsuharu
mituharu <at> math.s.chiba-u.ac.jp
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Message #29 received at 18222 <at> debbugs.gnu.org (full text, mbox):
> Date: Mon, 25 Aug 2014 08:28:59 +0900
> From: YAMAMOTO Mitsuharu <mituharu <at> math.s.chiba-u.ac.jp>
> Cc: Peter Hull <peterhull90 <at> gmail.com>, 18222 <at> debbugs.gnu.org
>
> I think it's worth trying also on other platforms that use gmalloc.
The problem is how to write the DUMPED and ALLOCATED_BEFORE_DUMPING
macros. For Cygwin, they use some intimate knowledge about Cygwin
runtime internals; the question is, do other platforms have similar
facilities and features.
There's also the MinGW way of getting rid of gmalloc, but it needs a
different feature: the ability to specify a user-defined sbrk
function (which MS-Windows supports).
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Message #32 received at 18222 <at> debbugs.gnu.org (full text, mbox):
>>>>> On Mon, 25 Aug 2014 05:39:58 +0300, Eli Zaretskii <eliz <at> gnu.org> said:
>> Date: Mon, 25 Aug 2014 08:28:59 +0900 From: YAMAMOTO Mitsuharu
>> <mituharu <at> math.s.chiba-u.ac.jp> Cc: Peter Hull
>> <peterhull90 <at> gmail.com>, 18222 <at> debbugs.gnu.org
>>
>> I think it's worth trying also on other platforms that use gmalloc.
> The problem is how to write the DUMPED and ALLOCATED_BEFORE_DUMPING
> macros. For Cygwin, they use some intimate knowledge about Cygwin
> runtime internals; the question is, do other platforms have similar
> facilities and features.
If the system malloc always returns a 16-byte aligned address (I'm not
sure if that is the case for *BSDs), and if we actually only need
8-byte alignment for memory allocated before dumping, then we can
determine whether the address has been allocated before dumping or not
by tweaking the address returned by malloc before dumping so it always
returns a value p such that (p & 8) == 8. Actually this is how
unexec_malloc etc. in unexmacosx.c work.
YAMAMOTO Mitsuharu
mituharu <at> math.s.chiba-u.ac.jp
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Message #35 received at 18222 <at> debbugs.gnu.org (full text, mbox):
On 8/24/2014 10:39 PM, Eli Zaretskii wrote:
> The problem is how to write the DUMPED and ALLOCATED_BEFORE_DUMPING
> macros. For Cygwin, they use some intimate knowledge about Cygwin
> runtime internals; the question is, do other platforms have similar
> facilities and features.
The macros on Cygwin don't use any knowledge about Cygwin runtime
internals. They use knowledge about how gmalloc and unexec work on
Cygwin. Prior to dumping, gmalloc uses a version of sbrk defined in
sheap.c, which allocates space in the static heap (also defined in
sheap.c). But the question still remains about what to do on other
platforms.
Ken
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(Mon, 25 Aug 2014 14:52:02 GMT)
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Message #38 received at 18222 <at> debbugs.gnu.org (full text, mbox):
> Date: Mon, 25 Aug 2014 08:17:49 -0400
> From: Ken Brown <kbrown <at> cornell.edu>
> CC: peterhull90 <at> gmail.com, 18222 <at> debbugs.gnu.org
>
> On 8/24/2014 10:39 PM, Eli Zaretskii wrote:
> > The problem is how to write the DUMPED and ALLOCATED_BEFORE_DUMPING
> > macros. For Cygwin, they use some intimate knowledge about Cygwin
> > runtime internals; the question is, do other platforms have similar
> > facilities and features.
>
> The macros on Cygwin don't use any knowledge about Cygwin runtime
> internals. They use knowledge about how gmalloc and unexec work on
> Cygwin.
Sorry, I meant the knowledge about the internals of sbrk used before
dumping.
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Message #41 received at 18222 <at> debbugs.gnu.org (full text, mbox):
On 8/25/2014 10:51 AM, Eli Zaretskii wrote:
>> Date: Mon, 25 Aug 2014 08:17:49 -0400
>> From: Ken Brown <kbrown <at> cornell.edu>
>> CC: peterhull90 <at> gmail.com, 18222 <at> debbugs.gnu.org
>>
>> On 8/24/2014 10:39 PM, Eli Zaretskii wrote:
>>> The problem is how to write the DUMPED and ALLOCATED_BEFORE_DUMPING
>>> macros. For Cygwin, they use some intimate knowledge about Cygwin
>>> runtime internals; the question is, do other platforms have similar
>>> facilities and features.
>>
>> The macros on Cygwin don't use any knowledge about Cygwin runtime
>> internals. They use knowledge about how gmalloc and unexec work on
>> Cygwin.
>
> Sorry, I meant the knowledge about the internals of sbrk used before
> dumping.
But I wonder if other platforms can do something similar. For DUMPED,
all they have to do is use a variable (like Cygwin's
bss_sbrk_did_unexec) that's set to 1 right before dumping and then reset
to 0. For ALLOCATED_BEFORE_DUMPING, maybe there's a way to find out the
top of the heap at the time of dumping and somehow reinitialize the
system malloc at startup to make sure that it only uses later addresses
after that? Or the suggestion of Yamamoto might work.
Ken
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(Thu, 28 Aug 2014 14:53:02 GMT)
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Message #44 received at 18222 <at> debbugs.gnu.org (full text, mbox):
I've installed my patch (with minor modifications) into the trunk as bzr
revision 117758. I'll leave the bug open for a while longer in case the
*BSD people want to discuss it.
Ken
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(Thu, 28 Aug 2014 19:35:02 GMT)
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Message #47 received at 18222 <at> debbugs.gnu.org (full text, mbox):
Ken Brown wrote:
> I've installed my patch (with minor modifications) into the trunk as
> bzr revision 117758. I'll leave the bug open for a while longer in
> case the *BSD people want to discuss it.
Closing a bug doesn't prevent further discussion.
(In my experience not closing it just means people tend to forget to do
that later.)
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You have taken responsibility.
(Thu, 28 Aug 2014 19:41:01 GMT)
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bug acknowledged by developer.
(Thu, 28 Aug 2014 19:41:03 GMT)
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Message #52 received at 18222-done <at> debbugs.gnu.org (full text, mbox):
Version: 24.5
> Closing a bug doesn't prevent further discussion.
> (In my experience not closing it just means people tend to forget to do
> that later.)
OK. Closed.
bug archived.
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bug unarchived.
Request was from
Glenn Morris <rgm <at> gnu.org>
to
control <at> debbugs.gnu.org
.
(Sat, 04 Oct 2014 16:36:03 GMT)
Full text and
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bug Marked as fixed in versions 25.1.
Request was from
Glenn Morris <rgm <at> gnu.org>
to
control <at> debbugs.gnu.org
.
(Sat, 04 Oct 2014 16:36:03 GMT)
Full text and
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bug No longer marked as fixed in versions 24.5.
Request was from
Glenn Morris <rgm <at> gnu.org>
to
control <at> debbugs.gnu.org
.
(Sat, 04 Oct 2014 16:36:03 GMT)
Full text and
rfc822 format available.
bug archived.
Request was from
Debbugs Internal Request <help-debbugs <at> gnu.org>
to
internal_control <at> debbugs.gnu.org
.
(Sun, 02 Nov 2014 12:24:04 GMT)
Full text and
rfc822 format available.
This bug report was last modified 10 years and 230 days ago.
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Copyright (C) 1999 Darren O. Benham,
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1994-97 Ian Jackson.