I'm working on this.

On Sat, Jul 19, 2025, 3:04 AM Eli Zaretskii <eliz@gnu.org> wrote:
Ping! Ping! João and Spencer, please respond.

> Cc: Eason Huang <aqua0210@foxmail.com>, 78862@debbugs.gnu.org
> Date: Sat, 05 Jul 2025 10:28:47 +0300
> From: Eli Zaretskii <eliz@gnu.org>
>
> Ping!
>
> > From: Eason Huang <aqua0210@foxmail.com>
> > Cc: João Távora <joaotavora@gmail.com>,  Spencer Baugh
> >  <sbaugh@janestreet.com>,  78862@debbugs.gnu.org
> > Date: Sun, 22 Jun 2025 19:27:56 +0800
> >
> > Eli Zaretskii <eliz@gnu.org> writes:
> >
> > >> From: Eason Huang <aqua0210@foxmail.com>
> > >> Date: Sun, 22 Jun 2025 15:05:06 +0800
> > >>
> > >> Hello Emacs dev,
> > >>
> > >> Recently, I found that if flymake-mode enabled before eglot,eglot can not
> > >> refresh the Flymake diagnostics.
> > >> Disable flymake with `M-x flymake-mode`, and then enable eglot
> > >> with `M-x eglot` can fix the issue. Or with the below snippet can fix
> > >> it:
> > >>
> > >> ```
> > >> (with-eval-after-load 'eglot
> > >>     (add-hook 'eglot-managed-mode-hook (lambda ()
> > >>                                          (flymake-mode -1)
> > >>                                          (flymake-mode 1))))
> > >>
> > >> ```
> > >>
> > >> Steps to reproduce:
> > >>
> > >> 1. put below config into the init.el file
> > >> ```
> > >> (use-package flymake
> > >>   :hook (prog-mode . flymake-mode))
> > >>
> > >> (use-package rust-mode
> > >>   :ensure t
> > >>   :defer t
> > >>   :custom (rust-mode-treesitter-derive (and (fboundp 'treesit-available-p)
> > >>                                             (treesit-available-p))))
> > >> ```
> > >> 2. Start Emacs 31
> > >> 3. Open any Rust project with a dependency
> > >> 4. Open any Rust file in a rust project(make sure it use a dependency),
> > >> such as main.rs, then flymake will report errors. Because I don't have
> > >> flymake rust backends,the errors is expected.
> > >>   
> > >> 5. Make sure `rust-analyzer` is in the PATH,My rust toolchain is as
> > >> below:
> > >>
> > >> ```
> > >> rustc --version
> > >> rustc 1.87.0 (17067e9ac 2025-05-09)
> > >>
> > >> rust-analyzer --version
> > >> rust-analyzer 1.87.0 (17067e9ac6d 2025-05-09)
> > >> ``
> > >> 6. Start eglot with `M-x eglot`, now the errors still exist. This is the
> > >> issue.
> > >>
> > >> 7. `M-x flymake-mode` to disable flymake
> > >> 8. `M-x eglot-reconnect` will refresh the Flymake diagnostics,and no
> > >> errors reported if your Rust project is compiled.
> > >>
> > >>
> > >> The issue only happened on Emacs 31, it works as expected on Emacs 30. 
> > >
> > > Thanks, I hope João and Spencer will have comments or suggestions
> > > about this.
> > >
> >
> > >
> > >
> >
> > Hello Eli, João and Spencer,
> >
> > I find out that it is related to `rust-ts-flymake-command`, when
> > customize it's value to `'("cargo" "clippy")`, it works as expected.
> >
> > It works with below rust config:
> >
> > ```
> > (use-package rust-mode
> >   :defer t
> >   :custom
> >   (rust-mode-treesitter-derive (and (fboundp 'treesit-available-p)
> >                                     (treesit-available-p)))
> >   (rust-ts-flymake-command '("cargo" "clippy")))
> >
> > ```
> >
> > May be this information help.
> >
> > --
> > Eason Huang
> >
> >
>
>
>
>