Hi all. A small contribution to the discussion. First of all, it's not an Automake defect that the user is allowed to override variables using the command line. This may be used e.g. for changing compile flags at 'make' time: make CFLAGS=-Wall Second, in the provided example, the 'install' target indeed depends on prog_PYTHON, while 'all' doesn't. Somebody made a decision to compile Python files at install time and not at compile time. Maybe because it is not known at compile time where the files will end up, or they have conflicting names, or for some other good reason. Third, and most important (I think) is that we need to note that "prog/x.py" is GENERATED, but is NOT marked so. Adding BUILT_SOURCES = prog/x.py to Makefile.am fixes the issue immediately. So, sorry to say this, but it looks like this defect is invalid. The file prog/x.py is meant to be built/generated at build time and must be marked as being built. Another point is that one needs to 'touch' x.src each time to test, which also is signalling that something may be wrong. But, this may be just a side effect of the minimalistic example. By the way, if the real code also needs to substitute just "$(libexecdir)", which is known at configure time, it should actually be 'configure' which generates prog/x.py. This would probably stop this issue from appearing in the first place... If you really, really want to fix something in Automake, you can use the attached patch, it seems to fix the issue. But, this is something I don't recommend, because next we'll be adding each and every language/script group to the 'all' target and that's probably not the point. That's why I'm not formatting the patch as I should be. -- Regards - Bogdan ('bogdro') D. (GNU/Linux & FreeDOS) X86 assembly (DOS, GNU/Linux): http://bogdro.evai.pl/index-en.php Soft(EN): http://bogdro.evai.pl/soft http://bogdro.evai.pl/soft4asm www.Xiph.org www.TorProject.org www.LibreOffice.org www.GnuPG.org