Hello everyone, I'm just about to turn on option subdir-objects in project gnuplot, but ran in to a snag. Make distcheck now fails in the distclean phase because distclean in one subdirectory removes dependency files that make, in another one, still needs. The trigger was this in docs/Makefile.am: doc2wxhtml_SOURCES = windows/doc2html.c ../src/version.c doc2wxhtml_CPPFLAGS = -DALL_TERM_DOC -DWXHELP -I../src $(AM_CPPFLAGS) The reference to windows/doc2html.c was what had me turn on subdir-objects. The reference to a source file from a neighboring ../src directory triggers the breakage. All is well in typical day-to-day operation, but since the distclean phase of a make distcheck kills src/.deps before visiting docs, make in docs now dies: Making distclean in docs Makefile:592: ../src/.deps/doc2wxhtml-version.Po: No such file or directory Tool versions: automake-1.14.1 and 1.15, autoconf-2.69, on current Cygwin. I've attached a copy of amhello modified to trigger the bug.